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The map label for this gene is 161870766

Identifier: 161870766

GI number: 161870766

Start: 1883638

End: 1884279

Strand: Direct

Name: 161870766

Synonym: NMCC_1841

Alternate gene names: NA

Gene position: 1883638-1884279 (Clockwise)

Preceding gene: 161870765

Following gene: 161870767

Centisome position: 87.47

GC content: 47.51

Gene sequence:

>642_bases
ATGAAGATAACGCACTGCAAATTAAAGAAAAAAGTACAGAAAGAACTGCTCCGTTTTTTTGTGCTGGAAGTTACCGCCCG
TTCTGCCGCCGATATTTTGGGTATCCATCCCAATTCGGCAGCACTGTTCTACCGTAAAATCCGCACGGTTATCAACCATC
ATTTGGCCTTGGCTGCCGATGAGGTTTTTGAGGGCCCTGTCGAGCCGGACGAAAGCGATTTCGGCGGACGGCGTAAAGGC
AGACGTGGTCGCGGTGCGGCAGGAAAAGTGGTTGTCTTCGGCATTCTGAAACGCAACGGACGGGTCTATACCGTTGTGGT
GGATAATGCCAAGTCTGAAACGTTACTCCCTGTCATCAAGAAGAAAATCATGCCGGACAGCATTGTTTATACCGATAGTC
TGAGCAGCTACGACAAGTTGGACGTGAGCGATTTCATTCATTACCGCATCAACCATTCCAAGGAATTTGCAGACCGTCAG
AACCACATTAACGGCATTGAGAACTTTTGGAATCAGGCAAAACGCGTCTTGCGAAAATACAACGGAATCGATCGTAAATC
TTTCCCGCTGTTCTTGAAAGAATGCGAATTTCGATTTAACTTCGGCACACCGTCTCAACAGCTTAAAATCCTGCGGGATT
AG

Upstream 100 bases:

>100_bases
GCACCTTAGAGAATCGTTCTCTTTGAGCTAAGGCGAGGCAACGCCGTACTGGTTTTTGTTAGGGGCTGTACTAGATTAGC
AGATATGTTACCCTCGAAAT

Downstream 100 bases:

>100_bases
TGTGGGATTTAGGGCTAATCTAGTACAGCCCCTAAATTTAATCCACTATATCGTGCCGTTGCCAAGGTTGGGAATGAGTC
TTTAAATATCGGTGTGATTG

Product: IS1016 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAADEVFEGPVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSYDKLDVSDFIHYRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFNFGTPSQQLKILRD

Sequences:

>Translated_213_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAADEVFEGPVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSYDKLDVSDFIHYRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFNFGTPSQQLKILRD
>Mature_213_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAADEVFEGPVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSYDKLDVSDFIHYRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFNFGTPSQQLKILRD

Specific function: Unknown

COG id: COG3676

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To insertion element IS1016 transposase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24506; Mature: 24506

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH
EVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIK
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHH
KKIMPDSIVYTDSLSSYDKLDVSDFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKY
HHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
NGIDRKSFPLFLKECEFRFNFGTPSQQLKILRD
CCCCCCCCHHHHHHCCEEECCCCCHHHHHEECC
>Mature Secondary Structure
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH
EVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIK
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHH
KKIMPDSIVYTDSLSSYDKLDVSDFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKY
HHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
NGIDRKSFPLFLKECEFRFNFGTPSQQLKILRD
CCCCCCCCHHHHHHCCEEECCCCCHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]