Click here to switch to the map view.

The map label for this gene is tspA

Identifier: 161870728

GI number: 161870728

Start: 1846195

End: 1848822

Strand: Direct

Name: tspA

Synonym: NMCC_1801

Alternate gene names: NA

Gene position: 1846195-1848822 (Clockwise)

Preceding gene: 161870720

Following gene: 161870732

Centisome position: 85.73

GC content: 55.25

Gene sequence:

>2628_bases
ATGCCCGCCGGCCGACTGCCCCGCCGATGCCCGATGATGACGAAATTTACAGACTGTACGCGGTCAAACCGTATTCAGCC
GCCAACCCACAGGGGATACATCTTGAAAAACAACAGACAAATCAAACTGATTGCCGCCTCCGTCGCAGTTGCCGCATCCT
TTCAGGCACATGCTGGACTGGGCGGACTGAATATCCAGTCCAACCTTGACGAACCCTTTTCCGGCAGCATTACCGTAACC
GGCGAAGAAGCCAAAGCCCTGCTAGGCGGCGGCAGCGTTACCGTTTCCGAAAAAGGCCTGACCGCCAAAGTCCACAAGTT
GGGCGACAAAGCCGTCATTGCCGTTTCTTCCGAACAGGCAGTCCGCGATCCCGTCCTGGTGTTCCGCATCGGCGCAGGCG
CACAGGTACGCGAATACACCGCCATCCTCGATCCTGTCGGCTACTCGCCCAAAACCAAATCTGCACTTTCAGACGGCAAG
ACACACCGCAAAACCGCTCCGACAGCAGAGTCCCAAGAAAATCAAAACGCCAAAGCCCTCCGCAAAACCGATAAAAAAGA
CAGCGCGAACGCAGCCGTCAAACCGGCATACAACGGCAAAACCCATACCGTCCGCAAAGGCGAAACGGTCAAACAGATTG
CCGCCGCCATCCGCCCGAAACACCTGACGCTCGAACAGGTTGCCGATGCGCTGCTGAAGGCAAACCCAAATGTTTCCGCA
CACGGCAGACTGCGTGCGGGCAGCGTGCTTCACATTCCGAATCTGAACAGGATCAAAGCGGAACAACCCAAACCGCAAAC
GGCGAAACCCAAAGCCGAAACCGCATCCATGCCGTCCGAACCGTCCAAACAGGCAACGGTAGAGAAACCGGTTGAAAAAC
CTGAAGCAAAAGTTGCCGCGCCCGAAGCAAAAGCGGAAAAACCGGCCGTTCGACCCGAACCTGTACCCGCTGCAAATACT
GCCGCATCGGAAACCGCTGCCGAATCCGCCCCCCAAGAAGCCGCCGCTTCTGCCATCGACACGCCGACCGACGAAACCGG
TAACGCCGTTTCCGAACCTGTCGAACAGGTTTCTGCCGAAGAAGAAACCGAAAGCGGACTGTTTGACGGTCTGTTCGGCG
GTTCGTACACCTTGCTGCTTGCCGGCGGAGGCGCGGCATTAATCGCCCTGCTGCTGCTTTTGCGCCTTGCCCAATCCAAA
CGCGCGCGCCGTACCGAAGAATCCGTCCCTGAGGAAGAGCCTGACCTTGACGACGCGGCAGACGACGGCATAGAAATCAC
CTTTGCCGAAGTCGAAACTCCGGCAACGCCCGAACCCGCTCCGAAAAACGATGTAAACGACACACTTGCCTTAGATGGGG
AATCTGAAGAAGAGTTATCGGCAAAACAAACGTTCGATGTCGAAACCGATACGCCTTCCAACCGCATCGACTTGGATTTC
GACAGCCTGGCAGCCGCGCAAAACGGCATTTTATCCGGCGCACTTACGCAGGATGAAGAAACCCAAAAACGCGCGGATGC
CGATTGGAACGCCATCGAATCCACAGACAGCGTGTACGAGCCCGAGACCTTCAACCCGTACAACCCTGTCGAAATCGTCA
TCGACACGCCCGAACCGGAATCTGTCGCCCAAACTGCCGAAAACAAACCGGAAACCGTCGATACCGATTTCTCCGACAAC
CTGCCCTCAAACAACCATATCGGCACAGAAGAAACAGCTTCCGCAAAACCTGCCTCACCCTCCGGACTGGCAGGCTTCCT
GAAGGCTTCCTCGCCCGAAACCATCTTGGAAAAAACAGTTGCCGAAGTCCAAACACCGGAAGAGTTGCACGATTTCCTGA
AAGTGTACGAAACCGATGCCGTCGCGGAAACTGCGCCTGAAACGCCCGATTTCAACGCCGCCGCAGACGATTTGTCCGCA
TTGCTTCAACCTGCCGAAGCACCGTCCGTTGAGGAAAATATAACGGAAACCGTTGCCGAAACACCCGACTTCAACGCCAC
CGCAGACGATTTGTCCGCATTACTTCAACCTTCTAAAGTACCTGCCGTTGAGGAAAATGCAGCGGAAACCGTTGCCGATG
ATTTGTCCGCACTGTTGCAACCTGCTGAAGCACCGGCCGTTGAGGAAAATGTAACGGAAACCGTTGCCGAAACACCCGAT
TTCAACGCCACCGCAGACGATTTGTCCGCATTACTTCAACCTTCTGAAGCACCTGCCGTTGAGGAAAATGCAGCGGAAAC
CGTTGCCGATGATTTGTCCGCACTGTTGCAACCTGCTGAAGCACCGGCCGTTGAGGAAAATGCAGCGGAAATCACTTTGG
AAACGCCTGATTCCAACACCTCTGAGGCAGACGCTTTGCCCGACTTCCTGAAAGACGGCGAGGAGGAAACGGTAGATTGG
AGCATCTACCTCTCGGAAGAAAATATCCCAAATAATGCAGATACCAGTTTCCCTTCGGAATCTGTAGGTTCTGACGCGCC
TTCCGAAGCGAAATACGACCTTGCCGAAATGTATCTCGAAATCGGCGACCGCGATGCCGCTGCCGAGACAGTGCAGAAAT
TGCTGGAAGAAGCGGAAGGCGACGTACTCAAACGTGCCCAAGCATTGGCGCAGGAATTGGGTATTTGA

Upstream 100 bases:

>100_bases
CAGATGTTTTTGAAAAAAGATGGAGATATGTCATAATTTGTAAAAACGGCGAATGATTGCCGTTTAAAATGTGGCGGCGG
TCGGTACATTCACATATTAA

Downstream 100 bases:

>100_bases
TTCCCAACTGCCCTTTCGCAGATCAAGGATGCCGTTTCAGACGGCATCTTTTTTGCCTTATCGGTGTAACGGATAAAGTT
TGAACCGGCACAGGCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: LOW QUALITY PROTEIN TspA Protein; Neisseria-Specific Antigen Protein TspA; Transmembrane Protein

Number of amino acids: Translated: 875; Mature: 874

Protein sequence:

>875_residues
MPAGRLPRRCPMMTKFTDCTRSNRIQPPTHRGYILKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSITVT
GEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQVREYTAILDPVGYSPKTKSALSDGK
THRKTAPTAESQENQNAKALRKTDKKDSANAAVKPAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSA
HGRLRAGSVLHIPNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAVRPEPVPAANT
AASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLFDGLFGGSYTLLLAGGGAALIALLLLLRLAQSK
RARRTEESVPEEEPDLDDAADDGIEITFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDF
DSLAAAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTAENKPETVDTDFSDN
LPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTVAEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSA
LLQPAEAPSVEENITETVAETPDFNATADDLSALLQPSKVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPD
FNATADDLSALLQPSEAPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLETPDSNTSEADALPDFLKDGEEETVDW
SIYLSEENIPNNADTSFPSESVGSDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI

Sequences:

>Translated_875_residues
MPAGRLPRRCPMMTKFTDCTRSNRIQPPTHRGYILKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSITVT
GEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQVREYTAILDPVGYSPKTKSALSDGK
THRKTAPTAESQENQNAKALRKTDKKDSANAAVKPAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSA
HGRLRAGSVLHIPNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAVRPEPVPAANT
AASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLFDGLFGGSYTLLLAGGGAALIALLLLLRLAQSK
RARRTEESVPEEEPDLDDAADDGIEITFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDF
DSLAAAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTAENKPETVDTDFSDN
LPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTVAEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSA
LLQPAEAPSVEENITETVAETPDFNATADDLSALLQPSKVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPD
FNATADDLSALLQPSEAPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLETPDSNTSEADALPDFLKDGEEETVDW
SIYLSEENIPNNADTSFPSESVGSDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI
>Mature_874_residues
PAGRLPRRCPMMTKFTDCTRSNRIQPPTHRGYILKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSITVTG
EEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQVREYTAILDPVGYSPKTKSALSDGKT
HRKTAPTAESQENQNAKALRKTDKKDSANAAVKPAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAH
GRLRAGSVLHIPNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAVRPEPVPAANTA
ASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLFDGLFGGSYTLLLAGGGAALIALLLLLRLAQSKR
ARRTEESVPEEEPDLDDAADDGIEITFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFD
SLAAAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTAENKPETVDTDFSDNL
PSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTVAEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSAL
LQPAEAPSVEENITETVAETPDFNATADDLSALLQPSKVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPDF
NATADDLSALLQPSEAPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLETPDSNTSEADALPDFLKDGEEETVDWS
IYLSEENIPNNADTSFPSESVGSDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI

Specific function: Unknown

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92489; Mature: 92358

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGRLPRRCPMMTKFTDCTRSNRIQPPTHRGYILKNNRQIKLIAASVAVAASFQAHAGL
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHHCCC
GGLNIQSNLDEPFSGSITVTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQA
CCCCCCCCCCCCCCCCEEEECHHHHHHCCCCEEEEECCCCCHHHHHCCCCEEEEECCCHH
VRDPVLVFRIGAGAQVREYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKAL
HHCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHH
RKTDKKDSANAAVKPAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSA
HHCCCCCCCCCEECCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
HGRLRAGSVLHIPNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAA
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCCC
PEAKAEKPAVRPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAE
CCHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
EETESGLFDGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAA
HHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DDGIEITFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDF
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHEECCCCCCCCCEEECCH
DSLAAAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPE
HHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCH
SVAQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
AEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENITETVAE
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHC
TPDFNATADDLSALLQPSKVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPD
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
FNATADDLSALLQPSEAPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLETPDSNT
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
SEADALPDFLKDGEEETVDWSIYLSEENIPNNADTSFPSESVGSDAPSEAKYDLAEMYLE
CHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHH
IGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI
HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAGRLPRRCPMMTKFTDCTRSNRIQPPTHRGYILKNNRQIKLIAASVAVAASFQAHAGL
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHHCCC
GGLNIQSNLDEPFSGSITVTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQA
CCCCCCCCCCCCCCCCEEEECHHHHHHCCCCEEEEECCCCCHHHHHCCCCEEEEECCCHH
VRDPVLVFRIGAGAQVREYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKAL
HHCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHH
RKTDKKDSANAAVKPAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSA
HHCCCCCCCCCEECCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
HGRLRAGSVLHIPNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAA
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCCCCC
PEAKAEKPAVRPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAE
CCHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
EETESGLFDGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAA
HHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DDGIEITFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDF
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHEECCCCCCCCCEEECCH
DSLAAAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPE
HHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCH
SVAQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
AEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENITETVAE
HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHC
TPDFNATADDLSALLQPSKVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPD
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
FNATADDLSALLQPSEAPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLETPDSNT
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
SEADALPDFLKDGEEETVDWSIYLSEENIPNNADTSFPSESVGSDAPSEAKYDLAEMYLE
CHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHH
IGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI
HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA