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The map label for this gene is ydeD [C]

Identifier: 161870631

GI number: 161870631

Start: 1736187

End: 1737071

Strand: Reverse

Name: ydeD [C]

Synonym: NMCC_1700

Alternate gene names: 161870631

Gene position: 1737071-1736187 (Counterclockwise)

Preceding gene: 161870632

Following gene: 161870630

Centisome position: 80.67

GC content: 57.85

Gene sequence:

>885_bases
TTGTATGACCATCTGACTTTATCACTCACTATGTTTTACCAAATCCTTGCCCTGATTATCTGGAGCAGCTCGTTTATTGC
CGCCAAATATGTCTATGGCGGCATCGATCCCGCATTGATGGTCGGCGTGCGCCTGCTAATTGCCGCGCTGCCTGCACTGC
CCGCCTGCCGCCGTCATGTCGGCAAGATTCCGCGTGAGGAATGGAAGCCGTTGCTGATTGTGTCGTTCGTCAACTATGTG
CTGACCCTGCTGCTTCAGTTTGTCGGGTTGAAATACACTTCCGCCGCCAGCGCATCGGTCATTGTCGGACTCGAGCCGCT
GCTGATGGTGTTTGTCGGACACTTTTTCTTCAACGACAAAGCGCGTGCCTACCACTGGATATGCGGCGCGGCGGCATTTG
CCGGTGTCGCGCTGCTGATGGCGGGCGGTGCGGAAGAGGGCGGCGAAGTCGGCTGGTTCGGCTGCCTGCTGGTGTTGTTG
GCGGGCGCGGGCTTTTGTGCCGCTATGCGTCCGACGCAAAGGCTGATTGCACGCATCGGCGCACCGGCATTCACATCTGT
TTCCATTGCCGCCGCATCGTTGATGTGCCTGCCGTTTTCGCTTGCTTTGGCGCAAAGTTATACCGTGGACTGGAGCGTCG
GAATGGTATTGTCGCTGCTGTATTTGGGTTTGGGGTGCGGCTGGTACGCCTATTGGCTGTGGAACAAGGGGATGAGCCGT
GTTCCTGCCAACGTTTCGGGACTGTTGATTTCGCTCGAACCCGTCGTCGGCGTGCTGCTGGCGGTTTTGATTTTGGGCGA
ACACCTGTCGCCCGTGTCCGCCTTGGGCGTGTTTGTCGTCATCGCCGCCACCTTGGTTGCCGGCCGGCTGTCGCATCAAA
AATAA

Upstream 100 bases:

>100_bases
TTCTCTAAGGTGCTGAAGCACCAAGTGAATCGGTTCCGTACTATTTGTACTGTCTGCGGCTTCGTCGCCTTGTCCTGATT
TTTGTTAATCCGCTATACTT

Downstream 100 bases:

>100_bases
AGTTGGGAAGCGGTATTTGATGATTGCCGAATAGGCTGAAATCTTTCCATCTCCATTCCTGCGAAAGCGGGTATCCGGAA
CGAAAAGACGGATATTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MYDHLTLSLTMFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHVGKIPREEWKPLLIVSFVNYV
LTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLL
AGAGFCAAMRPTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSR
VPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLVAGRLSHQK

Sequences:

>Translated_294_residues
MYDHLTLSLTMFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHVGKIPREEWKPLLIVSFVNYV
LTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLL
AGAGFCAAMRPTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSR
VPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLVAGRLSHQK
>Mature_294_residues
MYDHLTLSLTMFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHVGKIPREEWKPLLIVSFVNYV
LTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLL
AGAGFCAAMRPTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSR
VPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLVAGRLSHQK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31424; Mature: 31424

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDHLTLSLTMFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHV
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
GKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDK
CCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCC
ARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHC
APAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHC
VPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLVAGRLSHQK
CCCCHHHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYDHLTLSLTMFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALPACRRHV
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH
GKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFVGHFFFNDK
CCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCC
ARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMRPTQRLIARIG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHC
APAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGWYAYWLWNKGMSR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCHHC
VPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLVAGRLSHQK
CCCCHHHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]