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The map label for this gene is glr [H]

Identifier: 161870616

GI number: 161870616

Start: 1723002

End: 1723721

Strand: Reverse

Name: glr [H]

Synonym: NMCC_1685

Alternate gene names: 161870616

Gene position: 1723721-1723002 (Counterclockwise)

Preceding gene: 161870620

Following gene: 161870615

Centisome position: 80.05

GC content: 52.92

Gene sequence:

>720_bases
ATGGAGAACATCATTTATTTCGGCGACACGGCGCGCGTGCCTTACGGGACGAAATCTAAGGCGACCATCGAAAATTTCTC
GATGCAGATTGTCGATTTTCTGCTGGAACACGATGTCAAGGCGATGGTTATCGCGTGCAACACGATTGCGGCGGTGGCGG
GGCAGAAAATCCGTCAAAAGACGGGCAATATGCCTGTGTTGGACGTGATTTCCGCCGGCGCGAAAGCCGCGCTGGCAACG
ACGCGCAACAATAAAATCGGCATTATCGCCACCAATACCACAGTTAACAGCAATGCTTATGCGCGCGCCATCCATAGGAA
CAACCCTGATACGCTCGTCCGCACGCAGGCTGCACCGCTGCTCGTCCCTTTGGTGGAGGAAGGTTGGTTGGAACATGAAG
TTACCCGCCTGACCGTATGCGAATACCTCAAACCATTGCTTGCAGACGGCATCGATACGCTGGTGTTGGGCTGCACGCAC
TTTCCCTTGCTCAAGCCCTTAATCGGCAGGGAGGCGCACAATGTCGCGTTGGTTGATTCTGCAATTACGACTGCCGAAGA
AACCGCACGCGTCCTTGCTCAGGAAGGATTGCTCAATACCGACAACAACAATCCCGACTACCGTTTTTACGTCAGCGATA
TTCCTTTGAAATTCAGAACCATCGGCGAGCGTTTTCTGGGCAGGACGATGGAGCAGATTGAAATGGTGTCTTTGGGTTAA

Upstream 100 bases:

>100_bases
AAAAAGGATGGAAAATATCGGCAGGCAGCGACCCATCGGCGTTTTTGACTCGGGAATCGGCGGTTTGACCAATGTGCGCG
CGCTGATGGAGCGGCTGCCG

Downstream 100 bases:

>100_bases
AACGATGACGGAAAGCTGCCCGAGATTACAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCTAGACCTGTCG
GTGCGGAAACTTATCGGATA

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MENIIYFGDTARVPYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALAT
TRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTH
FPLLKPLIGREAHNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG

Sequences:

>Translated_239_residues
MENIIYFGDTARVPYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALAT
TRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTH
FPLLKPLIGREAHNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG
>Mature_239_residues
MENIIYFGDTARVPYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALAT
TRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTH
FPLLKPLIGREAHNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=198, Percent_Identity=32.8282828282828, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 26236; Mature: 26236

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIIYFGDTARVPYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQK
CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH
TGNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPL
HCCCCHHHHHHCCCCEEEEEECCCEEEEEEECCEECCCHHEEEEECCCCCCEEEECCCCE
LVPLVEEGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDS
EEEHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHH
AITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENIIYFGDTARVPYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQK
CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH
TGNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPL
HCCCCHHHHHHCCCCEEEEEECCCEEEEEEECCEECCCHHEEEEECCCCCCEEEECCCCE
LVPLVEEGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDS
EEEHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHH
AITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA