Click here to switch to the map view.

The map label for this gene is 161870583

Identifier: 161870583

GI number: 161870583

Start: 1684058

End: 1684633

Strand: Direct

Name: 161870583

Synonym: NMCC_1649

Alternate gene names: NA

Gene position: 1684058-1684633 (Clockwise)

Preceding gene: 161870582

Following gene: 161870586

Centisome position: 78.2

GC content: 45.31

Gene sequence:

>576_bases
TTGCTATGCACTCAAACAGATGGGGATAACGCGCAAAAAAAGACCACCACTTACAAAGAACAAGACCCGGCCAAAGTAAC
GCATTATTTGACACAGCCGGCCGAATTTTCCGACTACCAACGTGTTTATTTGGATGAAACAGGATTTGACCGCTACCTGT
TCCGTCCCTATGCCCGCAGCCTGAAAGGGCAAATAGTGAAAGCGCAGATAAGTGGAAAAAGATACCAACGCTTATCTTTG
GTGTCCGCACAAGTCGGCAACCGGCTGATTGCTCCGATGGTTTATCAAAATACGATGACCGGAGTCTTTTTTGAAGCGTG
GTTTCAGCAATGCCTACTGCCCGCATTGACTCAAAAATCGGTGATTATTTTAGATAATGCGCGATTTCACCGTATGGGTG
TCTTACGGGAAATGGCGGAAAAATTGGGACATAAGGTATTGCCTCTTGCACCTTATTCACCTGAGCTCAACCCGATTGAG
AAAGTGTGGGCGAATATTAAGCGGTATCTGCGAACCGTTTTGTCTGATTACGCCCGATTTGACGATGCACTACTGTCCTA
TTTTGATTTTAATTGA

Upstream 100 bases:

>100_bases
TCAAATCGGATAGGCAAAAACCGGCTCAATATATTGGGCAACACCAAGATGCCTATCTGCATGAAATCGCCAAACATTTT
GATTGTACGGCAGCCACCAT

Downstream 100 bases:

>100_bases
ATATACATTTGAATTAATTCGCACTTAATTTAAATGTGTTTTTAACTGTGCTTTATTTAAAGGCAATGAGAATGTGAAAG
TATCGGATCAATCCCAAAGC

Product: transposase

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; LOW QUALITY PROTEIN Transposase; ISSpo6 Transposase OrfB; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; ISHde6 Transposase OrfB; Phage Associated Protein; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MLCTQTDGDNAQKKTTTYKEQDPAKVTHYLTQPAEFSDYQRVYLDETGFDRYLFRPYARSLKGQIVKAQISGKRYQRLSL
VSAQVGNRLIAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIE
KVWANIKRYLRTVLSDYARFDDALLSYFDFN

Sequences:

>Translated_191_residues
MLCTQTDGDNAQKKTTTYKEQDPAKVTHYLTQPAEFSDYQRVYLDETGFDRYLFRPYARSLKGQIVKAQISGKRYQRLSL
VSAQVGNRLIAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIE
KVWANIKRYLRTVLSDYARFDDALLSYFDFN
>Mature_191_residues
MLCTQTDGDNAQKKTTTYKEQDPAKVTHYLTQPAEFSDYQRVYLDETGFDRYLFRPYARSLKGQIVKAQISGKRYQRLSL
VSAQVGNRLIAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIE
KVWANIKRYLRTVLSDYARFDDALLSYFDFN

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22178; Mature: 22178

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCTQTDGDNAQKKTTTYKEQDPAKVTHYLTQPAEFSDYQRVYLDETGFDRYLFRPYARS
CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHEEEECCCCCCHHHHHHHHHH
LKGQIVKAQISGKRYQRLSLVSAQVGNRLIAPMVYQNTMTGVFFEAWFQQCLLPALTQKS
HHCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VIILDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIEKVWANIKRYLRTVLSDYARF
EEEEECCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DDALLSYFDFN
HHHHHHHHCCC
>Mature Secondary Structure
MLCTQTDGDNAQKKTTTYKEQDPAKVTHYLTQPAEFSDYQRVYLDETGFDRYLFRPYARS
CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCHHEEEECCCCCCHHHHHHHHHH
LKGQIVKAQISGKRYQRLSLVSAQVGNRLIAPMVYQNTMTGVFFEAWFQQCLLPALTQKS
HHCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VIILDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIEKVWANIKRYLRTVLSDYARF
EEEEECCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DDALLSYFDFN
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA