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The map label for this gene is ywhC [H]

Identifier: 161870578

GI number: 161870578

Start: 1677451

End: 1678089

Strand: Direct

Name: ywhC [H]

Synonym: NMCC_1644

Alternate gene names: 161870578

Gene position: 1677451-1678089 (Clockwise)

Preceding gene: 161870574

Following gene: 161870582

Centisome position: 77.9

GC content: 56.03

Gene sequence:

>639_bases
ATGTTTCAAAATTTTGATTTGGGCGTGTTTCTGCTTGCCGTCCTGCCCGTGCTGCTCGCCATTACCGTCAGGGAGGTGGC
GCGCGGCTATACGGCGCGCTACTGGGGAGACAACACTGCCGAACAATACGGCAGGCTGACACTGAACCCCCTGCCCCATA
TCGATTTGGTCGGCACAATCATCGTACCGCTGCTTACTTTGATGTTTACGCCCTTCCTGTTCGGCTGGGCGCGTCCGATT
CCTATCGATTCGCGCAACTTCCGCAACCCGCGCCTTGCCTGGCGTTGCGTTGCCGCGTCCGGCCCGCTGTCGAATCTGGC
GATGGCTGTTCTGTGGGGCGTGGTTTTGGTGCTGACTCCGTATGTCGGTGGGGCGTATCAGATGCCGTTGGCTCAAATGG
CAAACTACGGTATTCTGATCAATGCGATTCTGTTCGCGCTCAACATCATCCCCATCCTGCCTTGGGACGGCGGCATTTTC
ATCGACACCTTCCTGTCGGCGAAATATTCGCAAGCGTTCCGCAAAATCGAACCTTATGGGACGTGGATTATCCTGCTGCT
TATGCTGACCGGGGTTTTGGGTGCGTTTATTGCACCGATTGTGCGGCTGGTGATTGCGTTTGTGCAGATGTTCGTCTGA

Upstream 100 bases:

>100_bases
TCTGATTTCTTATTCCAATAAAATCAGGTTAGATGATATATTGCCGCTTCTGTCTGTCAGCCGTTTCGGGCTGCACACCA
CATCTGTTCAAAGGAAAACC

Downstream 100 bases:

>100_bases
CTGGCTTTCAGACGGCATAAACGCTCCAGAAAACGCGGCAGGACATATTGCCCTGCCGCGTTTTCCTGTAGTGTAATCTT
ATTTTTTTCATCATTATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYGRLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPI
PIDSRNFRNPRLAWRCVAASGPLSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV

Sequences:

>Translated_212_residues
MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYGRLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPI
PIDSRNFRNPRLAWRCVAASGPLSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV
>Mature_212_residues
MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYGRLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPI
PIDSRNFRNPRLAWRCVAASGPLSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 23587; Mature: 23587

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYGRLTLNPLPHIDLVGTI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCEECCCCCCHHHHHHH
IVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGPLSNLAMAVLWGVVLVLTP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHH
YVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIFIDTFLSAKYSQAFRKIEPYG
CCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
TWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYGRLTLNPLPHIDLVGTI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCEECCCCCCHHHHHHH
IVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGPLSNLAMAVLWGVVLVLTP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHH
YVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIFIDTFLSAKYSQAFRKIEPYG
CCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
TWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]