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The map label for this gene is vdlD [H]

Identifier: 161870349

GI number: 161870349

Start: 1412409

End: 1412891

Strand: Direct

Name: vdlD [H]

Synonym: NMCC_1393

Alternate gene names: 161870349

Gene position: 1412409-1412891 (Clockwise)

Preceding gene: 161870348

Following gene: 161870357

Centisome position: 65.59

GC content: 55.28

Gene sequence:

>483_bases
ATGACACAACAACGCCAACTGCCTTCGCACGAACTCATTATGTCCGAACTGATGATGCCGGACACCGCCAATTTCAGCGG
CAACGTACACGGCGGCGAACTCCTGCTCCTGCTCGACCAAGTCGCCTATTCCTGCGCCAGCCGTTACAGCGGCAATTATT
GCGTTACCCTGTCGGTTGACAAAGTCCTGTTTAAAGAACCCATCCACATCGGCGATTTGGTTACCTTTTACGCCGCTGTC
AACTACACGGGACGCACCTCGATGGAAATCGGCATCCGTGTCGAAGCACAAAACATCCGCACCGGCGAAGTCCGCCATAC
CAACAGTTGCTACTTCACGATGGTTGCGGTCAAAGACGGCAAACCCGTCCCTGTCCCTCCGCTGGAAATCCTGACCGACC
GCCAACGCTGCCGCTACGAAAAAGCCAAAAAACGCAGAGACATCAGCCTGCAAGCCTCTGAAGACATGTCCTGCGGCTGC
TGA

Upstream 100 bases:

>100_bases
CTATCCCATCATAGCTTTTTTTAGCTTGAATTCCACTTCCCCATTCCCTAAAATTTCCCCGCACCCATTTCAAAACACCC
TTTCTTAAAACAGGTACACC

Downstream 100 bases:

>100_bases
CGGCGGACTATGCCGTCTGAAAGACAGGCACATCGCGCCATCCGTTTCTACTGCAAACGGATGAAATCAAGCAAATACCC
AAACACAGTCAAACAAATTT

Product: acyl-CoA hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYSCASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAV
NYTGRTSMEIGIRVEAQNIRTGEVRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC

Sequences:

>Translated_160_residues
MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYSCASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAV
NYTGRTSMEIGIRVEAQNIRTGEVRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
>Mature_159_residues
TQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYSCASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVN
YTGRTSMEIGIRVEAQNIRTGEVRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI18640736, Length=149, Percent_Identity=33.5570469798658, Blast_Score=85, Evalue=2e-17,
Organism=Homo sapiens, GI22165400, Length=146, Percent_Identity=32.1917808219178, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI32528286, Length=148, Percent_Identity=31.7567567567568, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI22165355, Length=146, Percent_Identity=32.1917808219178, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI32528282, Length=152, Percent_Identity=30.9210526315789, Blast_Score=71, Evalue=3e-13,
Organism=Homo sapiens, GI32528284, Length=146, Percent_Identity=31.5068493150685, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI75709208, Length=132, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17968; Mature: 17837

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYSCASRYSGNYCVTLSVD
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC
KVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTGEVRHTNSCYFTMVAVKDG
HHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEECCCEEEEEEEEECC
KPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
CCCCCCCHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCC
>Mature Secondary Structure 
TQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYSCASRYSGNYCVTLSVD
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC
KVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTGEVRHTNSCYFTMVAVKDG
HHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEECCCEEEEEEEEECC
KPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
CCCCCCCHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]