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The map label for this gene is pupA [H]

Identifier: 161870318

GI number: 161870318

Start: 1376544

End: 1378310

Strand: Reverse

Name: pupA [H]

Synonym: NMCC_1360

Alternate gene names: 161870318

Gene position: 1378310-1376544 (Counterclockwise)

Preceding gene: 161870319

Following gene: 161870317

Centisome position: 64.01

GC content: 52.24

Gene sequence:

>1767_bases
GTGCCCCTTTTGCGCTGGACTTTATCTGTCAAGGTTCTTGGGGGGGATCCGGGCGTTGATGCCGACAAGGCGGAATTTGT
CGATAAAGCCCTTGCGAAGGAGGGCATCTTTAATAATGCGGCGCAACGTTTTCCAAACAGCCTGTATGACTCTTCCTTTA
ATCGTAAGGCTACCGCCAACCGACGATACAGTTATATGCCGTTGCGGCATACCAAAGACGACCGCCAATGGGGAATCAAA
CTTGACCTGACCGGCACATATGGGCTGTTCGGGCGGGAACACGATTTCTTTGTCGGCTATGCCTACGGCGATGAAAAGAT
ACGTTCCGAATATCTGGAAATCTACGAACGCCGCCACAGAGTACGTCCGAATACGGGGGCAACGCACGGCGTGTATGCGG
GAAGTTGTCAGGAGGAGCCGGACGGCGATTTGTCGTCTCCTTTGGTCAGGGGGCATAAAGAACCCGATTGGAAGGCGTAC
GATGAAAAAGGCAACCGTACCGTTTATGCCGAAGAATGCAGGAACGCCAAGAAAATAAAAACCGAGCCCAAGCTCGATGC
CGAAGGCAAACAGGTATATTACTATGACGAATACAGCGGCAGCCGGACACCGGTATATGTCGATGTATATGAGCTGGACG
AAAAAGGCAACAAGATTCAGGAGACCAATCCCGACGGCTCGCCTGCCTTTACCGGTTTTTCCGGTACGGTGCCGGTTTGG
AAAACCGTCAAAGTGGCCGACGATCATGTTCCTGCGCTGTATAACTACGCCAAATACCTCAACACCAACAAAACCCATTC
GCTGACTGCCGGCACGCGTTTCAACGTAACCGGCCGACTGCATCTTTTGGGCGGGCTGCACTACACGCGCTATGAAACCT
CGCAAACCAAAGATATGCCTGTCCGCTATGGGCAGCCGGCAAGCGATTTTCAGACGGCATCGAGCATTAAGGCGGATCAG
GACCATTATACGGCCAAGATGCAAGGTCATAAATTGACGCCCTATGCAGGCATTACCTATGATTTGACACCGCAACAGAG
TATTTACGGAAGTTATACCAAAATCTTCAAACAGCAGGATAATGTCGATGTCAGTGCCAAAACCGTTTTACCGCCTTTGG
TCGGCACAAACTATGAGGTAGGCTGGAAAGGCGCGTTCTTGCAAGGACGGCTGAATGCTTCGTTCGCATTGTTTTACCTC
GAACAGAAAAACCGCACGGTCGTCGATTTTGGCTATGTTCCCGGAGCAGGCGGCAAGCAGGGGTCGTTCCAAACCGTTGC
CAAACCGATAGGCAAAGTGGTCAGCAGGGGTGCGGAATTCGAGTTGTCGGGTGAGTTGAACGAAGATTGGAAAGTCTTTG
CGGGTTACACCTACAACAAGAGCCGCTACAAAAACGCCGCCGAAGTCAACGCCGAACGCCTCGCCAAAAACACAGGCGCA
GACCCGTACAACTTCAGCAATTTCACACCCGTGCACATATTCCGTTTCGGAACGAGCTTCCATATACCGAATACGGGGCT
GACCGTCGGCGGCGGCGTGTCCGCACAAAGCGGCACAAGCAGCCTGTACAACATCCGTCAGGGCGGCTACGGGCTGATAG
ACGGTTTCGTCCGTTACGAATTGGGCAAACACGCCAAATTGAGCCTCATCGGTACGAACTTAAACGGACGCACTTATTTT
GAGAACAACTACAACCGTACGCGCGGCGCAAACAACTTCTATGGAGAGCCGCGCACTGTCAGCATGAAACTGGATTGGCA
GTTTTAA

Upstream 100 bases:

>100_bases
AAAGACGATTTTGTTAAAAACCGTTTCGATAATACTGCTTTCGAACAGTATCGCAGCCGCCGTGCCGCAGAACGCAAAGC
CGGTTTTGACGAGTGTATGA

Downstream 100 bases:

>100_bases
TTGAAAACCGTAGTTTTGCGGATGCCGTCTGAAACAGGGTATGTTTCAGACGGCATTTTTATGGAGGCAGGCCTATCGGG
GCGTATATTTGGAATTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MPLLRWTLSVKVLGGDPGVDADKAEFVDKALAKEGIFNNAAQRFPNSLYDSSFNRKATANRRYSYMPLRHTKDDRQWGIK
LDLTGTYGLFGREHDFFVGYAYGDEKIRSEYLEIYERRHRVRPNTGATHGVYAGSCQEEPDGDLSSPLVRGHKEPDWKAY
DEKGNRTVYAEECRNAKKIKTEPKLDAEGKQVYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPDGSPAFTGFSGTVPVW
KTVKVADDHVPALYNYAKYLNTNKTHSLTAGTRFNVTGRLHLLGGLHYTRYETSQTKDMPVRYGQPASDFQTASSIKADQ
DHYTAKMQGHKLTPYAGITYDLTPQQSIYGSYTKIFKQQDNVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYL
EQKNRTVVDFGYVPGAGGKQGSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKNAAEVNAERLAKNTGA
DPYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNIRQGGYGLIDGFVRYELGKHAKLSLIGTNLNGRTYF
ENNYNRTRGANNFYGEPRTVSMKLDWQF

Sequences:

>Translated_588_residues
MPLLRWTLSVKVLGGDPGVDADKAEFVDKALAKEGIFNNAAQRFPNSLYDSSFNRKATANRRYSYMPLRHTKDDRQWGIK
LDLTGTYGLFGREHDFFVGYAYGDEKIRSEYLEIYERRHRVRPNTGATHGVYAGSCQEEPDGDLSSPLVRGHKEPDWKAY
DEKGNRTVYAEECRNAKKIKTEPKLDAEGKQVYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPDGSPAFTGFSGTVPVW
KTVKVADDHVPALYNYAKYLNTNKTHSLTAGTRFNVTGRLHLLGGLHYTRYETSQTKDMPVRYGQPASDFQTASSIKADQ
DHYTAKMQGHKLTPYAGITYDLTPQQSIYGSYTKIFKQQDNVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYL
EQKNRTVVDFGYVPGAGGKQGSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKNAAEVNAERLAKNTGA
DPYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNIRQGGYGLIDGFVRYELGKHAKLSLIGTNLNGRTYF
ENNYNRTRGANNFYGEPRTVSMKLDWQF
>Mature_587_residues
PLLRWTLSVKVLGGDPGVDADKAEFVDKALAKEGIFNNAAQRFPNSLYDSSFNRKATANRRYSYMPLRHTKDDRQWGIKL
DLTGTYGLFGREHDFFVGYAYGDEKIRSEYLEIYERRHRVRPNTGATHGVYAGSCQEEPDGDLSSPLVRGHKEPDWKAYD
EKGNRTVYAEECRNAKKIKTEPKLDAEGKQVYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPDGSPAFTGFSGTVPVWK
TVKVADDHVPALYNYAKYLNTNKTHSLTAGTRFNVTGRLHLLGGLHYTRYETSQTKDMPVRYGQPASDFQTASSIKADQD
HYTAKMQGHKLTPYAGITYDLTPQQSIYGSYTKIFKQQDNVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYLE
QKNRTVVDFGYVPGAGGKQGSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKNAAEVNAERLAKNTGAD
PYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNIRQGGYGLIDGFVRYELGKHAKLSLIGTNLNGRTYFE
NNYNRTRGANNFYGEPRTVSMKLDWQF

Specific function: Specific receptor for the siderophore ferric pseudobactin 358 [H]

COG id: COG4773

COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787344, Length=375, Percent_Identity=29.0666666666667, Blast_Score=132, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 66026; Mature: 65895

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLRWTLSVKVLGGDPGVDADKAEFVDKALAKEGIFNNAAQRFPNSLYDSSFNRKATAN
CCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCHHHHCCCCCCCCCCC
RRYSYMPLRHTKDDRQWGIKLDLTGTYGLFGREHDFFVGYAYGDEKIRSEYLEIYERRHR
CCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHC
VRPNTGATHGVYAGSCQEEPDGDLSSPLVRGHKEPDWKAYDEKGNRTVYAEECRNAKKIK
CCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCHHCCCCCEEEEHHHHCCCHHCC
TEPKLDAEGKQVYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPDGSPAFTGFSGTVPVW
CCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
KTVKVADDHVPALYNYAKYLNTNKTHSLTAGTRFNVTGRLHLLGGLHYTRYETSQTKDMP
EEEEECCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEEEEEEECEEEEEECCCCCCCCC
VRYGQPASDFQTASSIKADQDHYTAKMQGHKLTPYAGITYDLTPQQSIYGSYTKIFKQQD
EECCCCHHHHHHHHHCCCCCCCEEEEECCCEECCCCCEEEECCCCHHHHHHHHHHHHHCC
NVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYLEQKNRTVVDFGYVPGAGGKQ
CCCEEHHEECCCCCCCCEEECCCEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCCCC
GSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKNAAEVNAERLAKNTGA
CCHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECHHHCCCHHHCCHHHHHHHCCC
DPYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNIRQGGYGLIDGFVRYE
CCCCCCCCCEEEEEEECCEEECCCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHH
LGKHAKLSLIGTNLNGRTYFENNYNRTRGANNFYGEPRTVSMKLDWQF
CCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
PLLRWTLSVKVLGGDPGVDADKAEFVDKALAKEGIFNNAAQRFPNSLYDSSFNRKATAN
CEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCHHHHCCCCCCCCCCC
RRYSYMPLRHTKDDRQWGIKLDLTGTYGLFGREHDFFVGYAYGDEKIRSEYLEIYERRHR
CCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHC
VRPNTGATHGVYAGSCQEEPDGDLSSPLVRGHKEPDWKAYDEKGNRTVYAEECRNAKKIK
CCCCCCCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCHHCCCCCEEEEHHHHCCCHHCC
TEPKLDAEGKQVYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPDGSPAFTGFSGTVPVW
CCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
KTVKVADDHVPALYNYAKYLNTNKTHSLTAGTRFNVTGRLHLLGGLHYTRYETSQTKDMP
EEEEECCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEEEEEEECEEEEEECCCCCCCCC
VRYGQPASDFQTASSIKADQDHYTAKMQGHKLTPYAGITYDLTPQQSIYGSYTKIFKQQD
EECCCCHHHHHHHHHCCCCCCCEEEEECCCEECCCCCEEEECCCCHHHHHHHHHHHHHCC
NVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYLEQKNRTVVDFGYVPGAGGKQ
CCCEEHHEECCCCCCCCEEECCCEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCCCC
GSFQTVAKPIGKVVSRGAEFELSGELNEDWKVFAGYTYNKSRYKNAAEVNAERLAKNTGA
CCHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECHHHCCCHHHCCHHHHHHHCCC
DPYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNIRQGGYGLIDGFVRYE
CCCCCCCCCEEEEEEECCEEECCCCCEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHH
LGKHAKLSLIGTNLNGRTYFENNYNRTRGANNFYGEPRTVSMKLDWQF
CCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1646376 [H]