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The map label for this gene is priB

Identifier: 161870197

GI number: 161870197

Start: 1227791

End: 1228093

Strand: Reverse

Name: priB

Synonym: NMCC_1237

Alternate gene names: 161870197

Gene position: 1228093-1227791 (Counterclockwise)

Preceding gene: 161870198

Following gene: 161870196

Centisome position: 57.03

GC content: 40.59

Gene sequence:

>303_bases
TTGGGATTCAATAATCTTGTTTCGCTTGCCGCGTTAATTGAAAAGGTTTTCCCTATTCGATATACGCCTGCCGGAATCTC
TGTCTTAGATATTATCTTAAAGCATGAATCATGGCAGAAAGAAAATGGACAGCAATGTTTTGTCCAATTGGAAATTCCGG
CACGGATTTTAGGCAGGCAGGCGGAAGAGTGGCAGTATCGGCAAGGTGTATATGTTCACGTCGAAGGTTTTTTGGCTCAA
AAAAGCAGACGTTCCCTGATGCCGATGCTCAGAATACAAAATATTAAAGAATATAAAGGTTAA

Upstream 100 bases:

>100_bases
CAAAACCAAACACGCCGTTACCGAAGCATCCCCTATGTTGGGTGGCGAAAAGGCTAAGAACCTGCTGAGCGGTGCGTCTG
AAGAAGCGGTTGCCCAATAA

Downstream 100 bases:

>100_bases
ACGACAATGGCTCGTCAATCATTCAAACGTAGAAAATTCTGCCGTTTCACGGCTGAAAAAATCCAAGAAGTCGATTACAA
ACAAGTTGATTTGCTGAAAG

Product: primosomal replication protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MGFNNLVSLAALIEKVFPIRYTPAGISVLDIILKHESWQKENGQQCFVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQ
KSRRSLMPMLRIQNIKEYKG

Sequences:

>Translated_100_residues
MGFNNLVSLAALIEKVFPIRYTPAGISVLDIILKHESWQKENGQQCFVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQ
KSRRSLMPMLRIQNIKEYKG
>Mature_99_residues
GFNNLVSLAALIEKVFPIRYTPAGISVLDIILKHESWQKENGQQCFVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQK
SRRSLMPMLRIQNIKEYKG

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS)

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PRIB_NEIM0 (A9LZQ2)

Other databases:

- EMBL:   CP000381
- RefSeq:   YP_001599367.1
- ProteinModelPortal:   A9LZQ2
- EnsemblBacteria:   EBNEIT00000012224
- GeneID:   5796617
- GenomeReviews:   CP000381_GR
- KEGG:   nmn:NMCC_1237
- GeneTree:   EBGT00050000021061
- HOGENOM:   HBG632331
- OMA:   NIKEYKG
- ProtClustDB:   CLSK878002
- BioCyc:   NMEN374833:NMCC_1237-MONOMER
- HAMAP:   MF_00720
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- Gene3D:   G3DSA:2.40.50.140

Pfam domain/function: SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 11618; Mature: 11487

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNNLVSLAALIEKVFPIRYTPAGISVLDIILKHESWQKENGQQCFVQLEIPARILGRQ
CCHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHCCC
AEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIKEYKG
CHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFNNLVSLAALIEKVFPIRYTPAGISVLDIILKHESWQKENGQQCFVQLEIPARILGRQ
CHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHCCC
AEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIKEYKG
CHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA