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The map label for this gene is zntR [C]

Identifier: 161870176

GI number: 161870176

Start: 1209346

End: 1209753

Strand: Reverse

Name: zntR [C]

Synonym: NMCC_1216

Alternate gene names: 161870176

Gene position: 1209753-1209346 (Counterclockwise)

Preceding gene: 161870184

Following gene: 161870170

Centisome position: 56.18

GC content: 40.93

Gene sequence:

>408_bases
ATGACTTATACCACTGCCAAAGCCGCCGAAAAAATAGGCATCTCCGCCCACACCCTACGTTTTTACGACAAAGAAGGTTT
GTTGCCTAATATCGGACGTGATGAATACGGTAACCGCTGTTTTACCGATAACGATTTGCAATGGTTGGGCTTATTGCAAT
GCTTGAAAAATACGGGGATGAGCTTAAAAGACATCAAACGCTTTGCGGAATGTACCGTCATTGGCGACGATACCATTGAA
GAACGCCTTTCCTTGTTTGAAAATCAAATAGAAAATGTGAAGTGTCAAATTGCCGAATTAAAACGCTATTTAGATTTGCT
TGAATACAAATTGGCGTTTTACCAAAAAGCGAAAGCATTAGGTTCGGTAAAAGCCGTAAATTTGCCGCAAATTCCTGAAA
CGGCTTAG

Upstream 100 bases:

>100_bases
TGACAAAGTTGCCTTACCTGAGCAACATAGCAACAGTTTACACTTTAGAGTTAACTCTAAAGCAAGTGTTTTTTACTGTT
TTTGTTTAGAAGGAGGGAAA

Downstream 100 bases:

>100_bases
TTTTAGTGCAATAAGCAGGATTTTTGTCCTGTTCGTAATAGAAATCAAAAATTTGTTGTTTAAAAAGCGGATTGTAAGCA
ATGATATAGTGGATTAACAA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDNDLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIE
ERLSLFENQIENVKCQIAELKRYLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA

Sequences:

>Translated_135_residues
MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDNDLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIE
ERLSLFENQIENVKCQIAELKRYLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA
>Mature_134_residues
TYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDNDLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEE
RLSLFENQIENVKCQIAELKRYLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 15355; Mature: 15224

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDNDLQWLGLLQCLKNTGM
CCCCHHHHHHHHCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
SLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKRYLDLLEYKLAFYQKAKAL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVKAVNLPQIPETA
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDNDLQWLGLLQCLKNTGM
CCCHHHHHHHHCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
SLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKRYLDLLEYKLAFYQKAKAL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVKAVNLPQIPETA
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]