Click here to switch to the map view.

The map label for this gene is 161870121

Identifier: 161870121

GI number: 161870121

Start: 1151486

End: 1151740

Strand: Direct

Name: 161870121

Synonym: NMCC_1160

Alternate gene names: NA

Gene position: 1151486-1151740 (Clockwise)

Preceding gene: 161870120

Following gene: 161870122

Centisome position: 53.47

GC content: 58.04

Gene sequence:

>255_bases
ATGAACAAACTTTTCATTACCGCCCTGTCCGCCCTCGCCTTGTCCGCCTGCGCCAGCACTTGGGAGGGCGCGAAACAAGA
CACCGCCCGCAACCTTGACAAAACACAGGCCGCCGCCGAACGCGCCGCCGAACAAACAGGCAACGCCGTCGAAAAAGGCT
GGGACAAAACCAAAGAAGCCGTCAAAAAAGGCGGCAATGCCGTCGGACGCGGCATTTCCCATCTCGGCGGAAAAATCGAA
AACGCCACCGAATAA

Upstream 100 bases:

>100_bases
GTAAGTATTTTCAGGCGGTCTTTAAGAATTTGACGCGGCCGTCTGAAATATGTCCCGTAAGGCAGAAACACCTTTAATAT
TCAAACCAAGGAGTTTAACC

Downstream 100 bases:

>100_bases
CCGATTCGCGATGCCGTCTGAAACCGCTTCAGACGGCATCGTCAGCACAAGACGCAAACCCATGAAAGCCTTTACCAAAA
TTACCGCCATCGTCGCCCCG

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MNKLFITALSALALSACASTWEGAKQDTARNLDKTQAAAERAAEQTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIE
NATE

Sequences:

>Translated_84_residues
MNKLFITALSALALSACASTWEGAKQDTARNLDKTQAAAERAAEQTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIE
NATE
>Mature_84_residues
MNKLFITALSALALSACASTWEGAKQDTARNLDKTQAAAERAAEQTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIE
NATE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8758; Mature: 8758

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLFITALSALALSACASTWEGAKQDTARNLDKTQAAAERAAEQTGNAVEKGWDKTKEA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VKKGGNAVGRGISHLGGKIENATE
HHHCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNKLFITALSALALSACASTWEGAKQDTARNLDKTQAAAERAAEQTGNAVEKGWDKTKEA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VKKGGNAVGRGISHLGGKIENATE
HHHCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA