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The map label for this gene is rpe [H]

Identifier: 161870087

GI number: 161870087

Start: 1112561

End: 1113289

Strand: Reverse

Name: rpe [H]

Synonym: NMCC_1125

Alternate gene names: 161870087

Gene position: 1113289-1112561 (Counterclockwise)

Preceding gene: 161870089

Following gene: 161870083

Centisome position: 51.7

GC content: 54.18

Gene sequence:

>729_bases
ATGACCGCCTACCGTATCGCACCCAGTATTTTGTCGGCAGACTTTGCCCGCCTCGGAGAAGAGGTGGAAAGCGTCATTGC
GGCAGGTGCAGATCTGATCCATTTTGACGTGATGGACAACCATTATGTGCCGAACCTGACCTTCGGCCCTATGGTTTGCG
CGGCGTTGAAGCCTTATGCAAGCGTGCCGATCGATGTGCATTTGATGGTCGAACCCGTTGACGACCTGATTCAGTCGTTT
GCCAAAGCAGGAGCATCGATTATCACTTTTCATCCCGAAGCGAGCCGCCATATCGACCGCAGCTTGAGCCTGATTCGTGA
TATGGGCTGTCAGGCGGGGCTGGTGTTGAATCCGGCAACGCCCGTATATCTGTTGGAAAACGTATTGGACAGGCTGGATA
TGGTTTTGCTGATGTCGGTCAACCCCGGATTCGGCGGACAAAGCTTCATCCCGCACACCCTTGAAAAAATCCGCCGGGTG
CGGGCGATGCTGGATCGGTACGAAGCACAAAGCGGGCGGCACATCGCCATCGAAGTGGACGGCGGCATCAAAACCGACAA
TATTGCCGCCGTTGCCCGAGCTGGTGCGGATACCTTTGTTGCCGGTTCTGCGATTTTCGGCAAACCAGACTATAAGGCGG
TGATTGATGCGATGAGGGCGGAACTGGAAAAAAGCGGCAGGCTGAACCTTGCGCCAATGATTGAAATAGAAATGCCGTCT
GAAAATTAG

Upstream 100 bases:

>100_bases
CGTGTGAAAGATGGTATTATGGCAGTTAACTTTTGTTAATAATGCTGTTTCGGGGCTTTCCCGCGTTGAGTCCGCCCGTA
AAGGCATTGAAGGAAAAAAT

Downstream 100 bases:

>100_bases
CTCTGTTTCAGACGGCATTGCGTTATTTTTCGACGGGCAGCCCGAAATGCAGGTAGGCGCGTTCGGTCGCCATCCTGCCG
CGCGGGGTGCGTTGCAGGAA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTAYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSF
AKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLNLAPMIEIEMPS
EN

Sequences:

>Translated_242_residues
MTAYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSF
AKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLNLAPMIEIEMPS
EN
>Mature_241_residues
TAYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFA
KAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVR
AMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLNLAPMIEIEMPSE
N

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=220, Percent_Identity=38.6363636363636, Blast_Score=155, Evalue=4e-38,
Organism=Homo sapiens, GI219879828, Length=220, Percent_Identity=36.8181818181818, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI24307923, Length=172, Percent_Identity=33.1395348837209, Blast_Score=93, Evalue=2e-19,
Organism=Escherichia coli, GI1789788, Length=225, Percent_Identity=66.2222222222222, Blast_Score=307, Evalue=4e-85,
Organism=Escherichia coli, GI1790523, Length=205, Percent_Identity=39.0243902439024, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1790754, Length=210, Percent_Identity=30.952380952381, Blast_Score=100, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=223, Percent_Identity=40.3587443946188, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6322341, Length=235, Percent_Identity=39.1489361702128, Blast_Score=164, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24586301, Length=216, Percent_Identity=37.962962962963, Blast_Score=152, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 26260; Mature: 26128

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHH
SVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPAT
CCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCC
PVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEVD
HHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLNLAPMIEIEMPS
CCCCCCCHHHHHHCCCCCEEECCEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
EN
CC
>Mature Secondary Structure 
TAYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHH
SVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPAT
CCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCC
PVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEVD
HHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
GGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLNLAPMIEIEMPS
CCCCCCCHHHHHHCCCCCEEECCEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
EN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1429456 [H]