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The map label for this gene is 161870051

Identifier: 161870051

GI number: 161870051

Start: 1070780

End: 1071133

Strand: Reverse

Name: 161870051

Synonym: NMCC_1087

Alternate gene names: NA

Gene position: 1071133-1070780 (Counterclockwise)

Preceding gene: 161870052

Following gene: 161870050

Centisome position: 49.74

GC content: 52.54

Gene sequence:

>354_bases
ATGCTTAACTTTAACCATTTATCCGGAAACATAATGATGGGCAACAAATTGACTCTGCCTGCCGAACTGCCTGACGAACA
GGATTTGCGGGCGGTATTGGCATACAATATGCGGCTTTTCCGCGTGAACAAGGGTTGGTCGCAAGAAGAATTGGCGCGGC
AATGCGGTTTGGACAGGACTTATGTGTCGGCAGTCGAGCGCAAACGCTGGAACATCGCCCTGTCGAATATCGAAAAAATG
GCGGCGGCTTTGGGCGTGGCGGCGTATCAGTTGCTGCTGCCGCCGCAGGAACGGTTGAACCTGATGACCAATTCCGCCGA
TACCCGACAAATGCCGTCTGAAAGCGGTATTTGA

Upstream 100 bases:

>100_bases
TCTTGATTTTACCTCTTTCCTCTTGATGTGTGTGTGTTTGGGTGTGGCTGCCGCCACCCCTTTTTTTGGCTTTTATGTGA
AGTAAAATCCGTAACAGCAA

Downstream 100 bases:

>100_bases
CCGCCGAACCATCCACCTCCCTTTTCCCGCCAATCGAAAGAATAAAAATGCCTGCAAACCTGTCTTCAGCACTGGAAACC
TTCAAACGGCAGCGCGATGC

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; HTH-Type Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Conserved Domain Protein

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLNFNHLSGNIMMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCGLDRTYVSAVERKRWNIALSNIEKM
AAALGVAAYQLLLPPQERLNLMTNSADTRQMPSESGI

Sequences:

>Translated_117_residues
MLNFNHLSGNIMMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCGLDRTYVSAVERKRWNIALSNIEKM
AAALGVAAYQLLLPPQERLNLMTNSADTRQMPSESGI
>Mature_117_residues
MLNFNHLSGNIMMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCGLDRTYVSAVERKRWNIALSNIEKM
AAALGVAAYQLLLPPQERLNLMTNSADTRQMPSESGI

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13221; Mature: 13221

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFNHLSGNIMMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCGLDRT
CCCCCCCCCEEEECCEEECCCCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHHCCCHH
YVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQMPSESGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNFNHLSGNIMMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCGLDRT
CCCCCCCCCEEEECCEEECCCCCCCHHHHHHHHHHCEEEEEECCCCCHHHHHHHHCCCHH
YVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQMPSESGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA