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The map label for this gene is ymfP [C]

Identifier: 161869999

GI number: 161869999

Start: 1020826

End: 1021437

Strand: Direct

Name: ymfP [C]

Synonym: NMCC_1032

Alternate gene names: 161869999

Gene position: 1020826-1021437 (Clockwise)

Preceding gene: 161869998

Following gene: 161870000

Centisome position: 47.4

GC content: 59.48

Gene sequence:

>612_bases
ATGGCCGCCCCCGCCGGTGTGGCCACCGAATGCCGCCTTACCGTACAAGGCGGCACCGACCGAGAAAGCGATGCCTCACT
GCTGGCGCGTCTGTTGGAAATCATCCGCCGACCGCCCGCAGGCGGCAACCGTTACGACTATAAAAACTGGGCGTTGAGTG
TTGACGGCGTAACCAGCGCATATGTTTATCCGCTGCGCCGCGGCTTGGGTACGGTGGATATTGCCATTACCTCCGCCGAC
GGTGTGTCGTCGGAAGAAACTGTGCGCCGCGTACAGGCTTATATCGACGAGATGCGCCCGGTAACGGCAAAAAATGCGCT
GGTACTCAAGCCAACCGTAACGGCGGTGCCTGTTACCGTGCAAGTCAAGCTCGACGGTATCGACTTGGACGAGGCCAAGC
GCCGCATACGGACGGCCCTAAAAGAATATTTCGACACCCTGATCCCCGGCGACGGCCTGACTGTGTCGCAAATCGAGGCT
GCTATCAGCAATGTGGATGGTGTGATCGACCGCCGTCTGACTGCGCCGACGGCCAACCGTGCCGCCGATACGGTTAACCG
CATCGAGTGGTTTAAAGCGGGCGCGATTAATGTAACGGAGATGCCGTCATGA

Upstream 100 bases:

>100_bases
GGCCGTCTGAATGCGTTGGTTGCGGCGGCACGGCGGAAATACCGGCAATCGCCGACGAGCCGGGCGCGGCCGCCAATGTG
GCGACGGCGAGGCGCAACTG

Downstream 100 bases:

>100_bases
GCTATCAAGACATCTTGCGGGGCCTGTTGCCCCCCGTGTCGTATGCCCGCAATGCCCCGCGTGTGCGGGCGCAGGCAGAA
ATAGACGGCGCAGCGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MAAPAGVATECRLTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSAYVYPLRRGLGTVDIAITSAD
GVSSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTVQVKLDGIDLDEAKRRIRTALKEYFDTLIPGDGLTVSQIEA
AISNVDGVIDRRLTAPTANRAADTVNRIEWFKAGAINVTEMPS

Sequences:

>Translated_203_residues
MAAPAGVATECRLTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSAYVYPLRRGLGTVDIAITSAD
GVSSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTVQVKLDGIDLDEAKRRIRTALKEYFDTLIPGDGLTVSQIEA
AISNVDGVIDRRLTAPTANRAADTVNRIEWFKAGAINVTEMPS
>Mature_202_residues
AAPAGVATECRLTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSAYVYPLRRGLGTVDIAITSADG
VSSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTVQVKLDGIDLDEAKRRIRTALKEYFDTLIPGDGLTVSQIEAA
ISNVDGVIDRRLTAPTANRAADTVNRIEWFKAGAINVTEMPS

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 21928; Mature: 21797

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPAGVATECRLTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSA
CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHH
YVYPLRRGLGTVDIAITSADGVSSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTV
HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEE
QVKLDGIDLDEAKRRIRTALKEYFDTLIPGDGLTVSQIEAAISNVDGVIDRRLTAPTANR
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
AADTVNRIEWFKAGAINVTEMPS
HHHHHHHHHHHHCCCCEECCCCC
>Mature Secondary Structure 
AAPAGVATECRLTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSA
CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHH
YVYPLRRGLGTVDIAITSADGVSSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTV
HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEE
QVKLDGIDLDEAKRRIRTALKEYFDTLIPGDGLTVSQIEAAISNVDGVIDRRLTAPTANR
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
AADTVNRIEWFKAGAINVTEMPS
HHHHHHHHHHHHCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]