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The map label for this gene is yfcN [C]

Identifier: 161869927

GI number: 161869927

Start: 960221

End: 960826

Strand: Reverse

Name: yfcN [C]

Synonym: NMCC_0959

Alternate gene names: 161869927

Gene position: 960826-960221 (Counterclockwise)

Preceding gene: 161869928

Following gene: 161869919

Centisome position: 44.62

GC content: 50.66

Gene sequence:

>606_bases
ATGAATACCGACTTCCAAAACATCCTCAAACAACTGGGCAAACAAGCCCAAAAAGAAGCGGCAGAAAAACAGGCAGCCGA
AAAAAACAAGCAAAAACAAGAACAGGATTTCGATTTTTCACAAGCAGTCGGACAAGTCTCCCCATTAAAAAACCGGCAGC
AATATTATGCGCCGCCCGACAAAACCCCCATCAAAGTCCGTCCCAAAGACAACCGCGCCGACGAAGAAAACTACTTCTAC
ATCGGCAGCACATACAACGACCCGCCCGCCAGCTTCAGCAAAAACGGACAGGGAAAAAACGACATCCAACGCCTGAAAAA
CGGATACTATCCCGTCGTTACCGATGTCGACCTGCACGGCTACACACAGGAAGAAGCCCAAAAAGTCCTCAACGAATTCA
TCGCATTCACCCAAAAACGCGGCGTATGCGGCGAAATCATCCACGGCAGCGGATTAGGTTCCAAAGGCTACAAACCCGTT
CTGAAAAATATGACCCGAAACTGGCTGATGCAACACCCCGACGTACTCGCCTACGCCGAACCCCGGGAAGGCAACGACGG
CTGCGTCCGCATCCTGCTCAAACGCAAATTAAGGCAGCAAGACTGA

Upstream 100 bases:

>100_bases
ACATACGCAGGCAACAAAATCATCCTCCCCCGATTGGCAAACATTCCGGCAAATTAAAACCCCGCCCGAAACAGCCATCG
GACAAATAACAGGAAAAAAT

Downstream 100 bases:

>100_bases
CAAATTTCTCCGACAGACTTGGCAGCACCGCACAATATCCGTATAATTTGCAAACCATTTCTGGGGGCGACCTTGGTTTC
GACGGGGGTTGCGAAGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVGQVSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFY
IGSTYNDPPASFSKNGQGKNDIQRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD

Sequences:

>Translated_201_residues
MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVGQVSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFY
IGSTYNDPPASFSKNGQGKNDIQRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD
>Mature_201_residues
MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVGQVSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFY
IGSTYNDPPASFSKNGQGKNDIQRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 22969; Mature: 22969

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVGQVSPLKNRQQYYAPPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
KTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDIQRLKNGYYPVVTDVDLHG
CCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCC
YTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPVLKNMTRNWLMQHPDVLAYAE
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
PREGNDGCVRILLKRKLRQQD
CCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVGQVSPLKNRQQYYAPPD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
KTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDIQRLKNGYYPVVTDVDLHG
CCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCC
YTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPVLKNMTRNWLMQHPDVLAYAE
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
PREGNDGCVRILLKRKLRQQD
CCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]