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The map label for this gene is rpmJ

Identifier: 161869853

GI number: 161869853

Start: 886022

End: 886147

Strand: Reverse

Name: rpmJ

Synonym: NMCC_0884

Alternate gene names: 161869853

Gene position: 886147-886022 (Counterclockwise)

Preceding gene: 161869854

Following gene: 161869852

Centisome position: 41.15

GC content: 49.21

Gene sequence:

>126_bases
ATGCAGGTTCTGTCTTCACTCAAAACCGCCAAACAACGCCACCGCGACTGTCAGATTGTCAGACGTAAAGGCAAAGTTTA
CGTCATCTGCAAAAGCAATCCGCGTTTTAAAGCGCGCCAACGCTGA

Upstream 100 bases:

>100_bases
TCTATACCGGCAAGCAGCGCAACGTCAATACCGAAGGCCGTGCCAGCAAATTCAACCAACGTTTCCAATCCGTAATGTCA
TCGTTTAGAAAGGACAAATA

Downstream 100 bases:

>100_bases
CCCCCTGCCCTTCCTGCTTCGGTTGTAAATCTCCTCCTGCCGCAAGCCCTTTTCAAAAAAATGCCGTCTGAAACAGAAAA
ATAGCGTTTCAGACGGCATT

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MQVLSSLKTAKQRHRDCQIVRRKGKVYVICKSNPRFKARQR

Sequences:

>Translated_41_residues
MQVLSSLKTAKQRHRDCQIVRRKGKVYVICKSNPRFKARQR
>Mature_41_residues
MQVLSSLKTAKQRHRDCQIVRRKGKVYVICKSNPRFKARQR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=40, Percent_Identity=77.5, Blast_Score=69, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL362_NEIM0 (A9M4E0)

Other databases:

- EMBL:   CP000381
- RefSeq:   YP_001599022.1
- ProteinModelPortal:   A9M4E0
- SMR:   A9M4E0
- EnsemblBacteria:   EBNEIT00000011314
- GeneID:   5795022
- GenomeReviews:   CP000381_GR
- KEGG:   nmn:NMCC_0884
- GeneTree:   EBGT00050000021534
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   NMEN374833:NMCC_0884-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4915; Mature: 4915

Theoretical pI: Translated: 12.18; Mature: 12.18

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLSSLKTAKQRHRDCQIVRRKGKVYVICKSNPRFKARQR
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MQVLSSLKTAKQRHRDCQIVRRKGKVYVICKSNPRFKARQR
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA