Definition | Neisseria meningitidis 053442, complete genome. |
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Accession | NC_010120 |
Length | 2,153,416 |
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The map label for this gene is 161869850
Identifier: 161869850
GI number: 161869850
Start: 882874
End: 883719
Strand: Reverse
Name: 161869850
Synonym: NMCC_0881
Alternate gene names: NA
Gene position: 883719-882874 (Counterclockwise)
Preceding gene: 161869851
Following gene: 161869846
Centisome position: 41.04
GC content: 53.19
Gene sequence:
>846_bases ATGAAAAACAAAACCTCATCACTTCTCTTATGGCTTGCCGCAATCATGCTGACCGCGTGTTCCCCGAACAAAGAAGATAA AACCAAAGAAACCGGCGCATCTGCCGCTTCGTCCCCGGCATCCGCCGCTTCGTCTTCCGCGCCCCAAACCGATTTGCAAC CGGCCGCATCCGCCCCTGATAACGTCAAGCAGGCAGAAAGCGCGCCGCCGTCAAATTGCACCGACCTGCACCCCGCCACC GGCATTGACGATCTCATGCAGCAAATCGCCGAACACATCGACTCGGACTGTCTGTTTGCCCTTTCCCATCACGAACTGGA AACCCGTTTCGGCTTACCCGACAGTGGCTATGACAACATACAGCGGCTGCTGTTTCCCGACATCCGCCCTGAAGATCCCG ACTACCATCAGAAAATCATACTGGCAATTGAAGACTTGCGTTACGGAAAGCGCACGATCAGCCGGCAGGCACAAGATGCC TTGATGGAACAGGAACGCCGCCTCCGAGAAGCGACGCTGTTGCTGACACAGGGCAGCGAAGAAACCCGCGGGCAAGGCGA GGAGCCGAAACGCACGCGTTATTTTGAAGTTTCGGCAACCCCTGCCTATTCGAGCCGGCACAACAACGGACTTGGCGGCA ATTTCCAATACATCGGCCAATTGCCCGGCTATCTGAAAATACACGGAGAAATGCTTGAAAACCAATCACTCTTCCGGCTG TCCAACCGTGAACGCAATCCCGACAAACCGTTTTTAGACATCCATTTTGACGAAAATGGCAAAATCACGCGTATTGTCGT TTACGAAAAAAACATCTACTTCAATCCAAACTTGGGGCGAAGATAA
Upstream 100 bases:
>100_bases TGTCGGCAATAACAGGTTCTTCGGTTCTATTAACAACAGGCCGTCTGAAAAATGAAACGGCAGGTTTTCAGACGGCCTTT TTAATATTGGAAACAATAGA
Downstream 100 bases:
>100_bases AAAAATGCCGTCTGAAAGCCTTTCAGACGGCATTTTTCAAGTAGGATATCAGGCGCGTTTGCGGAATTCGCCGGTGCGGG TATCGATTTCGACTTTGTCG
Product: lipoprotein
Products: NA
Alternate protein names: LOW QUALITY PROTEIN Lipoprotein
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKNKTSSLLLWLAAIMLTACSPNKEDKTKETGASAASSPASAASSSAPQTDLQPAASAPDNVKQAESAPPSNCTDLHPAT GIDDLMQQIAEHIDSDCLFALSHHELETRFGLPDSGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA LMEQERRLREATLLLTQGSEETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYIGQLPGYLKIHGEMLENQSLFRL SNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNLGRR
Sequences:
>Translated_281_residues MKNKTSSLLLWLAAIMLTACSPNKEDKTKETGASAASSPASAASSSAPQTDLQPAASAPDNVKQAESAPPSNCTDLHPAT GIDDLMQQIAEHIDSDCLFALSHHELETRFGLPDSGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA LMEQERRLREATLLLTQGSEETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYIGQLPGYLKIHGEMLENQSLFRL SNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNLGRR >Mature_281_residues MKNKTSSLLLWLAAIMLTACSPNKEDKTKETGASAASSPASAASSSAPQTDLQPAASAPDNVKQAESAPPSNCTDLHPAT GIDDLMQQIAEHIDSDCLFALSHHELETRFGLPDSGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA LMEQERRLREATLLLTQGSEETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYIGQLPGYLKIHGEMLENQSLFRL SNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNLGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31485; Mature: 31485
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKTSSLLLWLAAIMLTACSPNKEDKTKETGASAASSPASAASSSAPQTDLQPAASAPD CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCC NVKQAESAPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALSHHELETRFGLPDSGYDNI HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEHHHHHHHHHHCCCCCCCHHHH QRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDALMEQERRLREATLLLTQGSE HHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCH ETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYIGQLPGYLKIHGEMLENQSLFRL HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEEEHHHHHCCCHHHHH SNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNLGRR HCCCCCCCCCEEEEEECCCCCEEEEEEEECCEEECCCCCCC >Mature Secondary Structure MKNKTSSLLLWLAAIMLTACSPNKEDKTKETGASAASSPASAASSSAPQTDLQPAASAPD CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCC NVKQAESAPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALSHHELETRFGLPDSGYDNI HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEHHHHHHHHHHCCCCCCCHHHH QRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDALMEQERRLREATLLLTQGSE HHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCH ETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYIGQLPGYLKIHGEMLENQSLFRL HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEEEHHHHHCCCHHHHH SNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNLGRR HCCCCCCCCCEEEEEECCCCCEEEEEEEECCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA