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The map label for this gene is rdgC [H]

Identifier: 161869786

GI number: 161869786

Start: 820561

End: 821460

Strand: Reverse

Name: rdgC [H]

Synonym: NMCC_0809

Alternate gene names: 161869786

Gene position: 821460-820561 (Counterclockwise)

Preceding gene: 161869787

Following gene: 161869785

Centisome position: 38.15

GC content: 52.22

Gene sequence:

>900_bases
ATGTGGTTCAAGCAGATTAGTTTTTATCCGCTCAACAAAGAAAAGCTGCCTGAGGCGGACGCACTTGCCGACAAACTTGC
TGAAGCTGAATTTACCCATTGCCAAGGCTTAGACTGGTTCAGCGAAGGCTTTACCGCACCGGTTTCATTCTCCCCGGAAC
TCGTTTTCCCTGCCGACTTTACCTTGCGCGTCGCCCTGAAAAAAGAAGAAAAAGTCCTGCCTGCCGGCGTCATCCGCGAT
ATTTTGGAAGAGAAGGTAGCGGAAATCCAAAACAATGAAGCCCGCAATGTCGGTCGCAAAGAAAAACAAGAGCTTAAAGA
GCAAATTACAGACGACCTGCTGCCCCGAGCGTTTACCCGCAGCAGCCGTACAGAAGCGGTGTTTAACACCCGCCACGGCT
ACCTGCTCGTCAATAACGCGGCTTCCGCCAAAGCAGAAAACATCCTGACCAAGCTGCGCGAAGCTTTGGGCGGTTTGGAA
GCCTCACTGCCGAATACCAAACAATCGCCCTCTTCCCTGATGACCGGCTGGCTGTTGCAAGGGCATTGCGAAGGCGGTTT
TGAATTGGACAGCGATTGCGAACTCAAAGGCACGGGCGATATTGTTCCCGTCGTCAAAGTATCCAAACAAGATTTAACCG
CCGACGAAGTGGTTCAACACGTCAAAAACGGTAAAACCGTAACCCAGCTCGGTTTGGTTTGGCGCGAACAAATCGCCTTT
ATCCTCACGCAAGACTTCACACTCAAGCGCATCCAATACCTCGACGTATTGCAGGAAGAAGCCGAAAGCAACGGCGACGA
TGCCGCCGGTCTCGCCTTCGCCTCGCAAATCCTGATGGCGGAATCCGTCAGCATCATGTTGGAAGAGCTGGTTTCCTATT
TGGGCGGCTGGCAAGATTGA

Upstream 100 bases:

>100_bases
CCGCAAAGAAGAGAAAAACCGCTTCAAGAAGAAAACCAAAGTCAGTGTGAAAAAACAATTCAGCAAATAATTCCCGACAT
TTCAAACAATAGGAAACATT

Downstream 100 bases:

>100_bases
TTTTTCAGACGGCTTTTATACCGTCAGCCAAAATCCAATGGAATAACCCTTATGCTTAAACATCTCGCATTCCTACTGCC
CGCCATGATGTTCGCCCTCC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MWFKQISFYPLNKEKLPEADALADKLAEAEFTHCQGLDWFSEGFTAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRD
ILEEKVAEIQNNEARNVGRKEKQELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAF
ILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQILMAESVSIMLEELVSYLGGWQD

Sequences:

>Translated_299_residues
MWFKQISFYPLNKEKLPEADALADKLAEAEFTHCQGLDWFSEGFTAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRD
ILEEKVAEIQNNEARNVGRKEKQELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAF
ILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQILMAESVSIMLEELVSYLGGWQD
>Mature_299_residues
MWFKQISFYPLNKEKLPEADALADKLAEAEFTHCQGLDWFSEGFTAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRD
ILEEKVAEIQNNEARNVGRKEKQELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAF
ILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQILMAESVSIMLEELVSYLGGWQD

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=299, Percent_Identity=35.1170568561873, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33248; Mature: 33248

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKQISFYPLNKEKLPEADALADKLAEAEFTHCQGLDWFSEGFTAPVSFSPELVFPADF
CCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEECCCC
TLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEKQELKEQITDDLLPRAFTR
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHC
SSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLEASLPNTKQSPSSLMTGWLLQ
CCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHE
GHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAF
ECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQILMAESVSIMLEELVSYLGGWQD
HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWFKQISFYPLNKEKLPEADALADKLAEAEFTHCQGLDWFSEGFTAPVSFSPELVFPADF
CCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEECCCC
TLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEKQELKEQITDDLLPRAFTR
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHC
SSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLEASLPNTKQSPSSLMTGWLLQ
CCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHE
GHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAF
ECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQILMAESVSIMLEELVSYLGGWQD
HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10655208 [H]