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The map label for this gene is ytqB [H]

Identifier: 161869691

GI number: 161869691

Start: 718767

End: 719333

Strand: Reverse

Name: ytqB [H]

Synonym: NMCC_0711

Alternate gene names: 161869691

Gene position: 719333-718767 (Counterclockwise)

Preceding gene: 161869692

Following gene: 161869690

Centisome position: 33.4

GC content: 51.15

Gene sequence:

>567_bases
ATGTTATTGCAAAACATCCTTCCATTCGCCCATTGCCTTTTGCGGAAGGCACTTCCCGAAGGTGGCAATGCTTTGGACGG
CACCGCCGGCAACGGACACGACACCCTTTTCCTCGCACAAACCGCAGGCATCCGGGGGAAAGTGTGGGCATTCGACATCC
AGCCGCAAGCCCTGAGCCGCACTCGATGCCGTCTGAAAGAAGCGAGATACGAGAATGTGCAACTCATCTTAGACGGACAC
GAAAACCTGAAACAATATGTTTCAGAACCACTAAATGCCGCCATTTTCAATTTCGGCTGGCTGCCCGGCGGGGACAAAAG
CCTTACCACCCGCACGGAAACCAGCATTGCCGCCCTTTCTGCCACCTTATCCCTACTGAAAGAAAACGGTATGCTTATTG
CCGTCCTCTATCCGGGACACGAAAACGGCAAACAGGAGGCAGAAGCAATCGAACAATGGGCAAAAAACCTGCCTCAAGAA
CAGTTTGCCGTTTTGAGTTACGGCTTTACCAACCGGAAAAACAACCCGCCCTATCTGTTGGCATTTGAAAAGTTACGTCA
AAAATAA

Upstream 100 bases:

>100_bases
GCAGCCTGCCGAATAATCCGCACGAAGCATGACGTGTCATATCTTTCAATACCTTACCGGACAACGGTAAGGTATTTTTA
TTTTCAGACAGCATTTAAAA

Downstream 100 bases:

>100_bases
ATGTTTGCGGTAAAATAAGCCGATTCTAACCCTTATTTTGATACGAGCCGACCATGCAATATCTGATTGTCAAATACAGC
CATCAAATCTTCGTTACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGIRGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGH
ENLKQYVSEPLNAAIFNFGWLPGGDKSLTTRTETSIAALSATLSLLKENGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
QFAVLSYGFTNRKNNPPYLLAFEKLRQK

Sequences:

>Translated_188_residues
MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGIRGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGH
ENLKQYVSEPLNAAIFNFGWLPGGDKSLTTRTETSIAALSATLSLLKENGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
QFAVLSYGFTNRKNNPPYLLAFEKLRQK
>Mature_188_residues
MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGIRGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGH
ENLKQYVSEPLNAAIFNFGWLPGGDKSLTTRTETSIAALSATLSLLKENGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
QFAVLSYGFTNRKNNPPYLLAFEKLRQK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 20891; Mature: 20891

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGIRGKVWAFDIQPQALSR
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHH
TRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLPGGDKSLTTRTETSIAALS
HHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEHHHHHHHHHH
ATLSLLKENGMLIAVLYPGHENGKQEAEAIEQWAKNLPQEQFAVLSYGFTNRKNNPPYLL
HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEE
AFEKLRQK
EHHHHHCC
>Mature Secondary Structure
MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGIRGKVWAFDIQPQALSR
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHH
TRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLPGGDKSLTTRTETSIAALS
HHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEHHHHHHHHHH
ATLSLLKENGMLIAVLYPGHENGKQEAEAIEQWAKNLPQEQFAVLSYGFTNRKNNPPYLL
HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEE
AFEKLRQK
EHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]