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The map label for this gene is glyQ

Identifier: 161869281

GI number: 161869281

Start: 293220

End: 294125

Strand: Direct

Name: glyQ

Synonym: NMCC_0286

Alternate gene names: 161869281

Gene position: 293220-294125 (Clockwise)

Preceding gene: 161869280

Following gene: 161869282

Centisome position: 13.62

GC content: 56.07

Gene sequence:

>906_bases
ATGCTTACCTTCCAACAAATCATCTTCAAACTGCAAACATTCTGGGCAGACAAAGGCTGCACCGTCATCCAACCCTTCGA
CATGGAAGTCGGTGCAGGTACTTCCCATCCCGCCACCTGCCTGCGCGCGCTCGGGCCCGAGCCTTGGTTTGCCGCCTACG
TCCAACCCAGCCGCCGCCCCAAAGACGGCCGCTACGGCGACAACCCCAACCGCCTGCAACACTATTACCAATTCCAAGTC
GCCCTCAAACCCGCCCCCGCCAATATCCAAGACCTTTATCTCGACTCCCTGCGCGAATTGGGCATCGACCCCAAAGTGCA
CGACATCCGCTTTGTCGAAGACGACTGGGAAAACCCCACCCTCGGTGCGTGGGGTTTGGGCTGGGAAGTCTGGCTCAACG
GTATGGAAGTAACCCAGTTCACCTATTTCCAACAAGTCGGCGGCATCGACTGCACCCCCGTACTCGGCGAAATCACCTAC
GGCATCGAACGCTTGGCGATGTACCTGCAAGGCGTGGAAAACGTCTATGACCTCGTTTGGGCAAAAACGCTGGACGGTAA
TACAGTAACTTACGGCGACGTGTACCACCAAAACGAAGTCGAACAATCCACCTACAACTTCGAATACAGCGATGCCGATT
GGCTGCTGCGCCAGTTCAACGACTACGAAGCGCAAGCCAAACGCCTGCTTGCCGAAGAAAACGCCGCCCTCGCCTTGCCT
GCCTACGAGCTGGTTCTCAAAGCGGGGCATACGTTCAATCTTTTAGACGCACGCGGCGCGATTTCCGTAACCGAGCGGGC
AACTTATATTGGACGTATTCGTGCATTGAGCCGCGCCGTGGCGCAAAAATATGTTGAAAGCCGCGAAAAACTGGGCTTCC
CTTTAATGAAGGCAAACGCCGCCTAA

Upstream 100 bases:

>100_bases
TGTATGCCGTGTTTTCAAATCAGTCTGTCTTCGAGATAAACCTATCCAAACAGCAATGGAAACAGTAAAATAAACCCTTT
ATTTTATCGAATCATAAGCC

Downstream 100 bases:

>100_bases
GGGGGCGACGATTTTTTACGTTCGGGCGGCACGATAAGGCAGCCGTCCGGAAGCCATTATATTTTTTAGGAAAATCATGC
CTGTCTATTTCCGCACCCCA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQV
ALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEAQAKRLLAEENAALALP
AYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRAVAQKYVESREKLGFPLMKANAA

Sequences:

>Translated_301_residues
MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQV
ALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEAQAKRLLAEENAALALP
AYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRAVAQKYVESREKLGFPLMKANAA
>Mature_301_residues
MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQV
ALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEAQAKRLLAEENAALALP
AYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRAVAQKYVESREKLGFPLMKANAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=297, Percent_Identity=72.7272727272727, Blast_Score=459, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_NEIM0 (A9M125)

Other databases:

- EMBL:   CP000381
- RefSeq:   YP_001598448.1
- ProteinModelPortal:   A9M125
- SMR:   A9M125
- EnsemblBacteria:   EBNEIT00000011097
- GeneID:   5796970
- GenomeReviews:   CP000381_GR
- KEGG:   nmn:NMCC_0286
- GeneTree:   EBGT00050000020284
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- BioCyc:   NMEN374833:NMCC_0286-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34210; Mature: 34210

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRP
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCC
KDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITYGIERLAMYLQGVENVYDLVW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEAQAKRLLAEENAALALP
HEECCCCEEEECCCCCCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEECH
AYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRAVAQKYVESREKLGFPLMKANA
HHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
A
C
>Mature Secondary Structure
MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRALGPEPWFAAYVQPSRRP
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCC
KDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGIDPKVHDIRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITYGIERLAMYLQGVENVYDLVW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQFNDYEAQAKRLLAEENAALALP
HEECCCCEEEECCCCCCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCEEECH
AYELVLKAGHTFNLLDARGAISVTERATYIGRIRALSRAVAQKYVESREKLGFPLMKANA
HHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA