Click here to switch to the map view.

The map label for this gene is rpmE2 [H]

Identifier: 161723144

GI number: 161723144

Start: 2489205

End: 2489468

Strand: Reverse

Name: rpmE2 [H]

Synonym: BTH_I2213

Alternate gene names: 161723144

Gene position: 2489468-2489205 (Counterclockwise)

Preceding gene: 83720796

Following gene: 83718944

Centisome position: 65.35

GC content: 56.82

Gene sequence:

>264_bases
ATGAAACAAGGCATTCACCCGGATTACCGCGAAGTCGTCTTCCAAGACATGTCGAACGGCTTCAAGTTCATCACGCGCTC
CACGATCCAGACGCGCGAAACCATCGAACTCGACGGCAAGACCTACCCGCTCGCGAAGATCGAAGTGTCGTCGGAATCGC
ACTCTTTCTACACCGGCCAGCAAAAGATCATGGATACGGCGGGCCGCGTCGAGAAGTTCAAGAACAAGTTCGGCGCACGC
GCCAGCGGCAAGGCCGCGAAGTAA

Upstream 100 bases:

>100_bases
CGCGCCCAGCACGCATGCGCCGGCTGTTTCCGGACATCGTGCAACGCGCGCTGCGATGCGCAAGCGGCGGGCTGGCTACC
GCTCTTACACAGGAAAAACC

Downstream 100 bases:

>100_bases
GCTTCGCGCCCGCACCGGCAACCGGCGTCGAGCCGGGCCGGTTCCCGCAAAAAAGGCAGCCCAGGCTGCCTTTTTTTGTC
CCTGTTGATCCCATGCCGCC

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKQGIHPDYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQQKIMDTAGRVEKFKNKFGAR
ASGKAAK

Sequences:

>Translated_87_residues
MKQGIHPDYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQQKIMDTAGRVEKFKNKFGAR
ASGKAAK
>Mature_87_residues
MKQGIHPDYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQQKIMDTAGRVEKFKNKFGAR
ASGKAAK

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367109, Length=84, Percent_Identity=50, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 9864; Mature: 9864

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQGIHPDYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQ
CCCCCCCCHHHHHHHHHCCCCEEHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCEECCH
QKIMDTAGRVEKFKNKFGARASGKAAK
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKQGIHPDYREVVFQDMSNGFKFITRSTIQTRETIELDGKTYPLAKIEVSSESHSFYTGQ
CCCCCCCCHHHHHHHHHCCCCEEHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCEECCH
QKIMDTAGRVEKFKNKFGARASGKAAK
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA