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The map label for this gene is rpmF

Identifier: 161611304

GI number: 161611304

Start: 1571379

End: 1571561

Strand: Reverse

Name: rpmF

Synonym: pc1315

Alternate gene names: 161611304

Gene position: 1571561-1571379 (Counterclockwise)

Preceding gene: 46446950

Following gene: 46446948

Centisome position: 65.09

GC content: 44.26

Gene sequence:

>183_bases
ATGGCAGTGCCACGTAACCGTTTGTCAAATGCACGTAAAAATTCGAAACGTGCTCATCACGCAAAAAAACCAAAGAGCCT
TTCTATTTGTAGTAATTGTGGAACAGCGCGTCTTCCTCACTGCAGCTGTAAAGCTTGTGGAACATATGCTGACCGAACTC
CTACAACCCAGGAAGCTCAATAA

Upstream 100 bases:

>100_bases
AAGAGCCTTTCGAAGATGAGCAAGATATTGAAGATGGGTACCAACCCTTTGCTAATCTCGATTGGAAAGAATAAGTTTAA
TTGATCAGGAGACTTTAACC

Downstream 100 bases:

>100_bases
ACTCTTAAAGAGTGATAAGCTTGCGTATTGGAATTGATTTAATGGGAAGCGAAAGCTCTCCCATTACTCTTTTTGAAGCT
GTTTATTTAGCTGCACAAAA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAVPRNRLSNARKNSKRAHHAKKPKSLSICSNCGTARLPHCSCKACGTYADRTPTTQEAQ

Sequences:

>Translated_60_residues
MAVPRNRLSNARKNSKRAHHAKKPKSLSICSNCGTARLPHCSCKACGTYADRTPTTQEAQ
>Mature_59_residues
AVPRNRLSNARKNSKRAHHAKKPKSLSICSNCGTARLPHCSCKACGTYADRTPTTQEAQ

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_PARUW (Q6MBL0)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008314.2
- ProteinModelPortal:   Q6MBL0
- SMR:   Q6MBL0
- STRING:   Q6MBL0
- GeneID:   2781054
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1315
- NMPDR:   fig|264201.1.peg.1315
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- ProtClustDB:   PRK12286
- BioCyc:   CPRO264201:PC1315-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6554; Mature: 6422

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPRNRLSNARKNSKRAHHAKKPKSLSICSNCGTARLPHCSCKACGTYADRTPTTQEAQ
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVPRNRLSNARKNSKRAHHAKKPKSLSICSNCGTARLPHCSCKACGTYADRTPTTQEAQ
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA