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The map label for this gene is plpC [H]

Identifier: 161525413

GI number: 161525413

Start: 2456864

End: 2457661

Strand: Reverse

Name: plpC [H]

Synonym: Bmul_2243

Alternate gene names: 161525413

Gene position: 2457661-2456864 (Counterclockwise)

Preceding gene: 161525414

Following gene: 161525412

Centisome position: 71.27

GC content: 66.17

Gene sequence:

>798_bases
ATGCAACGACGCTTCATGCTGAAGTTCGCGGCGGCGCTCGGCGCAGCCGCGCTGTTCGCGGGCGCGCAAGCCGCGCAGGC
CGAAACCATCAAGGTAGGCGTGACGGGCGGCCCGCACGCGCAGATCATGGAGGTCGTGAAGAAGGTCGCCGCAAAGAGCG
GACTCGACGTGCGCATCGTCGAATTCTCCGACTACGTGCAGCCGAACGCGGCGCTCGCGGCCGGCGATCTCGACGCGAAC
AGCTATCAGCACGATCCGTATCTGCAGGCGCAGGTGAAGGACCGCGGCTACAAGCTGATCAAGGTCGCGGACACCGTCAC
GTTCCCGATGGGCATTTATTCGAAGCGCGTGAAATCGCTGGCCGAGCTGAAGCCCGGTGCGCGCGTCGCCATCCCGAACG
ATCCGACCAACGGCGGCCGCGCGCTGCTGTTGCTGCAGAAGCAGGGCGTGCTGAAGCTGCGCGCGGATGCGGGGCTCAAG
GCGACGCCGCTCGACATCGTCGACAATCCGCGCAAGCTGAAGATCGTCGAGCTCGACGCGGCGCAGATTCCGCGTTCGCT
CGGCGACGTCGACGCGGCGGCGATCAACACGAACTATGCGATGGAAGCGGGGCTGAAGCCGAAGCAGGACGCGATCGCGA
TCGAGGGTCCGAACGGCCCATACGCGAACGTCATCGCGATCCGCGAGGCGGACCGCAACAAGCCGTGGGTCGCGAAGCTG
GTCGCGGCCTATCATTCGCCGGAGGTGAAGCAGTTCATCGACGGCAAGTTCGGCGGCGCGGTGATCGCCGCCTGGTGA

Upstream 100 bases:

>100_bases
ATCCTGATCGTGTTCGTGCAGATCGTGCAGTCGTTCGGCGACTGGCTGGTCCGGCGCCTGAGCCACAAGTAAGCGACATT
CATTCTCATCGGGGGAGACG

Downstream 100 bases:

>100_bases
CGCATTGCGTCTCGCATGCCCGACGGTGATTAGAGTCGCTGATCGAAAACCCGGGCTTTGCGTCCGGGTTTTTTCTCTTT
TAAAATAGAACGACCGTTCG

Product: YaeC family lipoprotein

Products: NA

Alternate protein names: PLP3 [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MQRRFMLKFAAALGAAALFAGAQAAQAETIKVGVTGGPHAQIMEVVKKVAAKSGLDVRIVEFSDYVQPNAALAAGDLDAN
SYQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSLAELKPGARVAIPNDPTNGGRALLLLQKQGVLKLRADAGLK
ATPLDIVDNPRKLKIVELDAAQIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANVIAIREADRNKPWVAKL
VAAYHSPEVKQFIDGKFGGAVIAAW

Sequences:

>Translated_265_residues
MQRRFMLKFAAALGAAALFAGAQAAQAETIKVGVTGGPHAQIMEVVKKVAAKSGLDVRIVEFSDYVQPNAALAAGDLDAN
SYQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSLAELKPGARVAIPNDPTNGGRALLLLQKQGVLKLRADAGLK
ATPLDIVDNPRKLKIVELDAAQIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANVIAIREADRNKPWVAKL
VAAYHSPEVKQFIDGKFGGAVIAAW
>Mature_265_residues
MQRRFMLKFAAALGAAALFAGAQAAQAETIKVGVTGGPHAQIMEVVKKVAAKSGLDVRIVEFSDYVQPNAALAAGDLDAN
SYQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSLAELKPGARVAIPNDPTNGGRALLLLQKQGVLKLRADAGLK
ATPLDIVDNPRKLKIVELDAAQIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANVIAIREADRNKPWVAKL
VAAYHSPEVKQFIDGKFGGAVIAAW

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=269, Percent_Identity=49.4423791821561, Blast_Score=249, Evalue=1e-67,
Organism=Escherichia coli, GI1790093, Length=245, Percent_Identity=47.7551020408163, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28249; Mature: 28249

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRFMLKFAAALGAAALFAGAQAAQAETIKVGVTGGPHAQIMEVVKKVAAKSGLDVRIV
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE
EFSDYVQPNAALAAGDLDANSYQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSL
EECCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECEEECCHHHHHHHHHHH
AELKPGARVAIPNDPTNGGRALLLLQKQGVLKLRADAGLKATPLDIVDNPRKLKIVELDA
HHCCCCCEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHCCCCCEEEEEEECH
AQIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANVIAIREADRNKPWVAKL
HHCCHHHCCCCCEEECCCEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHH
VAAYHSPEVKQFIDGKFGGAVIAAW
HHHHCCCHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MQRRFMLKFAAALGAAALFAGAQAAQAETIKVGVTGGPHAQIMEVVKKVAAKSGLDVRIV
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE
EFSDYVQPNAALAAGDLDANSYQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSL
EECCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECEEECCHHHHHHHHHHH
AELKPGARVAIPNDPTNGGRALLLLQKQGVLKLRADAGLKATPLDIVDNPRKLKIVELDA
HHCCCCCEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHCCCCCEEEEEEECH
AQIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANVIAIREADRNKPWVAKL
HHCCHHHCCCCCEEECCCEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCHHHHH
VAAYHSPEVKQFIDGKFGGAVIAAW
HHHHCCCHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8335249; 8406866 [H]