Click here to switch to the map view.

The map label for this gene is vdlD [H]

Identifier: 161525384

GI number: 161525384

Start: 2429685

End: 2430197

Strand: Reverse

Name: vdlD [H]

Synonym: Bmul_2214

Alternate gene names: 161525384

Gene position: 2430197-2429685 (Counterclockwise)

Preceding gene: 161525385

Following gene: 161525380

Centisome position: 70.47

GC content: 64.52

Gene sequence:

>513_bases
ATGTCCCATTCGTCCCCCGTTCCGGCTCCCCTCGACCGCAACGAAACCGTATTCCGCTTCCTCGCCGAACCGTCGTCCGT
GAACTTCGGCGGCAAGGTGCACGGGGGCGCGCTGATGAAATGGATCGACGAGGTCGCGTATGCATGCGCGGCGGTCTGGT
CGAGCCGCTACTGCGTGACGGTCAGCGTCGGCAACATCCGCTTTCAGCGTCCGATCCTCGTCGGCAACCTCGTCGAGCTG
AAGGCGCGTGTCGTCGCGACCGGCCGCACCAGCATGCACATTCACGTGTCCGTGCATGCCGGCGATCCGAAGGGCGGCGT
ACTGCGTCAGACGACCGATTGTCTCGTCGTGTTCGTGGCCGTCGACGAGAACGGCAATCCGCTGCCGGTGCCGACGTTCG
TGCCCGAAACCGACGAGCAGAAGCGGCTCGCGAAATACGCGATGGACGTGCGCGCGGCACTCGACAAGATCGTCGAGATG
AAGCCGGAAGAGGTCGCGAAGGGCGAAGTGTGA

Upstream 100 bases:

>100_bases
GCGTGACGGTCCGCTATTGAGCGCTGCGTGGCGCGGCGCGTTGTCGCAGTGCAACGTATAATCGCGCCGTTACAGCGCCG
CTGTTGCCTGGAGTTAAACG

Downstream 100 bases:

>100_bases
CGACGCGGGGGCGCGTGCGCCCCCGTTTGCATCGCGCCGCGCGGGCCGACGCTCAGCGCGTGCCGACCATCTGCTCCGGC
CTGACCCACTCGTCGAATTC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSHSSPVPAPLDRNETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVTVSVGNIRFQRPILVGNLVEL
KARVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVAVDENGNPLPVPTFVPETDEQKRLAKYAMDVRAALDKIVEM
KPEEVAKGEV

Sequences:

>Translated_170_residues
MSHSSPVPAPLDRNETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVTVSVGNIRFQRPILVGNLVEL
KARVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVAVDENGNPLPVPTFVPETDEQKRLAKYAMDVRAALDKIVEM
KPEEVAKGEV
>Mature_169_residues
SHSSPVPAPLDRNETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVTVSVGNIRFQRPILVGNLVELK
ARVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVAVDENGNPLPVPTFVPETDEQKRLAKYAMDVRAALDKIVEMK
PEEVAKGEV

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528286, Length=143, Percent_Identity=34.965034965035, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI32528284, Length=143, Percent_Identity=34.965034965035, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI75709208, Length=143, Percent_Identity=34.965034965035, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI32528282, Length=143, Percent_Identity=34.965034965035, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1787506, Length=135, Percent_Identity=34.8148148148148, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18498; Mature: 18366

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSSPVPAPLDRNETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVT
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEE
VSVGNIRFQRPILVGNLVELKARVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVA
EEECCEEEECCEEECHHHHHEEEEEEECCCEEEEEEEEECCCCCCCEEEECCCEEEEEEE
VDENGNPLPVPTFVPETDEQKRLAKYAMDVRAALDKIVEMKPEEVAKGEV
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure 
SHSSPVPAPLDRNETVFRFLAEPSSVNFGGKVHGGALMKWIDEVAYACAAVWSSRYCVT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEE
VSVGNIRFQRPILVGNLVELKARVVATGRTSMHIHVSVHAGDPKGGVLRQTTDCLVVFVA
EEECCEEEECCEEECHHHHHEEEEEEECCCEEEEEEEEECCCCCCCEEEECCCEEEEEEE
VDENGNPLPVPTFVPETDEQKRLAKYAMDVRAALDKIVEMKPEEVAKGEV
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]