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The map label for this gene is 161525319

Identifier: 161525319

GI number: 161525319

Start: 2367138

End: 2367965

Strand: Direct

Name: 161525319

Synonym: Bmul_2149

Alternate gene names: NA

Gene position: 2367138-2367965 (Clockwise)

Preceding gene: 161525316

Following gene: 161525320

Centisome position: 68.64

GC content: 71.62

Gene sequence:

>828_bases
ATGGGCGAAACCGGCGTGACGCAAGCGCCGTGCCGGCTGCCGCGCCCCGCTGCGACATATTGCCCCGCTGGCGCGCGCCG
TACGGGTTTCGAAAGGACGCGGGTGCGCGAATTGCGCTACAGTCGCAACCGCCGCCGCGCGACGCATGGCGCCGCGCCGG
CCGGCGACCGTTCCGTCCGATCGAGCCCCAGGATGTCGTCTGCCCGCCCCGCGCCGCACCGGCGCCTTTCCCGCTTCATC
CGCACCGCCGCGGCGCTGGCCGTTGCGGCCGCGCTCGCCGCGTGCACGCACGACGAGGCGCGCTGGCATCTCACCGACGT
CACGGGCCACCTGCCCGACCTGTCGTTCGACCTGACGGGCGGCGACGGCCGGCCGGTCGATGCCGCCGCGTTCCGCGGCC
GCGTCGCGCTCGTCTACTTCGGCTACACGCATTGCCCGGACGTCTGTCCGGAAACGATGGCGCGGCTGATGGAAGTGCTC
GCGAAGCTCGGCCCGCAGGCGAACGACGTCCGCATCCTGTTCGTATCGGTCGATCCCGCACGCGACACGCCGCAGGCGAT
GCAGTCCTACGTCGCCGCGTTCGATGCCGAACACGCGCGCGGGCTGACGGGCACCGACCGGCAGATCGAATCGCTCGCGA
AACGCTATCGCGTCGCGTATCAGATGGAAAAGCGCGACCCGTCCGGCGGCTACGAAGTCACGCACAGCTCCGCCGTCTAC
GTGTTCGACGTGAACGGCCGCGCGCGGCTGCTCGCGACCGACCGCGACTCGCCCGACGCCATCGCCGCCGACGTGCGCCG
GATCATCGACACCGCTTCCGCAACCTGA

Upstream 100 bases:

>100_bases
GCCGGAACGGATTGCATCGATTCGATGTCTGAGGGACGGCCCGCCGGGCCGCCGCTGCGCGAATGGAATTGTGCGCATCT
TACCGCGTCGGCGCGCGGAG

Downstream 100 bases:

>100_bases
ATGACGACATGAACGACATGAACAAGACGACCTTCAAGATGCTCGCCGCGATCGCCGCACTCTGCGCCGGCGCCCATGCG
TATGCCGCCGGCGCGATCAC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MGETGVTQAPCRLPRPAATYCPAGARRTGFERTRVRELRYSRNRRRATHGAAPAGDRSVRSSPRMSSARPAPHRRLSRFI
RTAAALAVAAALAACTHDEARWHLTDVTGHLPDLSFDLTGGDGRPVDAAAFRGRVALVYFGYTHCPDVCPETMARLMEVL
AKLGPQANDVRILFVSVDPARDTPQAMQSYVAAFDAEHARGLTGTDRQIESLAKRYRVAYQMEKRDPSGGYEVTHSSAVY
VFDVNGRARLLATDRDSPDAIAADVRRIIDTASAT

Sequences:

>Translated_275_residues
MGETGVTQAPCRLPRPAATYCPAGARRTGFERTRVRELRYSRNRRRATHGAAPAGDRSVRSSPRMSSARPAPHRRLSRFI
RTAAALAVAAALAACTHDEARWHLTDVTGHLPDLSFDLTGGDGRPVDAAAFRGRVALVYFGYTHCPDVCPETMARLMEVL
AKLGPQANDVRILFVSVDPARDTPQAMQSYVAAFDAEHARGLTGTDRQIESLAKRYRVAYQMEKRDPSGGYEVTHSSAVY
VFDVNGRARLLATDRDSPDAIAADVRRIIDTASAT
>Mature_274_residues
GETGVTQAPCRLPRPAATYCPAGARRTGFERTRVRELRYSRNRRRATHGAAPAGDRSVRSSPRMSSARPAPHRRLSRFIR
TAAALAVAAALAACTHDEARWHLTDVTGHLPDLSFDLTGGDGRPVDAAAFRGRVALVYFGYTHCPDVCPETMARLMEVLA
KLGPQANDVRILFVSVDPARDTPQAMQSYVAAFDAEHARGLTGTDRQIESLAKRYRVAYQMEKRDPSGGYEVTHSSAVYV
FDVNGRARLLATDRDSPDAIAADVRRIIDTASAT

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=160, Percent_Identity=38.75, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI281182722, Length=160, Percent_Identity=38.75, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI281182716, Length=160, Percent_Identity=38.75, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI153791313, Length=160, Percent_Identity=38.75, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI4759068, Length=134, Percent_Identity=35.8208955223881, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17531419, Length=137, Percent_Identity=31.3868613138686, Blast_Score=88, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6319498, Length=134, Percent_Identity=36.5671641791045, Blast_Score=105, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6319511, Length=134, Percent_Identity=31.3432835820896, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19920710, Length=157, Percent_Identity=31.8471337579618, Blast_Score=96, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 30037; Mature: 29906

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGETGVTQAPCRLPRPAATYCPAGARRTGFERTRVRELRYSRNRRRATHGAAPAGDRSVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHC
SSPRMSSARPAPHRRLSRFIRTAAALAVAAALAACTHDEARWHLTDVTGHLPDLSFDLTG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEC
GDGRPVDAAAFRGRVALVYFGYTHCPDVCPETMARLMEVLAKLGPQANDVRILFVSVDPA
CCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
RDTPQAMQSYVAAFDAEHARGLTGTDRQIESLAKRYRVAYQMEKRDPSGGYEVTHSSAVY
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEE
VFDVNGRARLLATDRDSPDAIAADVRRIIDTASAT
EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GETGVTQAPCRLPRPAATYCPAGARRTGFERTRVRELRYSRNRRRATHGAAPAGDRSVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHC
SSPRMSSARPAPHRRLSRFIRTAAALAVAAALAACTHDEARWHLTDVTGHLPDLSFDLTG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEC
GDGRPVDAAAFRGRVALVYFGYTHCPDVCPETMARLMEVLAKLGPQANDVRILFVSVDPA
CCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
RDTPQAMQSYVAAFDAEHARGLTGTDRQIESLAKRYRVAYQMEKRDPSGGYEVTHSSAVY
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEE
VFDVNGRARLLATDRDSPDAIAADVRRIIDTASAT
EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]