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The map label for this gene is yedA [H]

Identifier: 161525250

GI number: 161525250

Start: 2275345

End: 2276829

Strand: Reverse

Name: yedA [H]

Synonym: Bmul_2080

Alternate gene names: 161525250

Gene position: 2276829-2275345 (Counterclockwise)

Preceding gene: 161525256

Following gene: 161525241

Centisome position: 66.02

GC content: 70.37

Gene sequence:

>1485_bases
ATGACGCCGCTCGACCGTCTGCTCGATTTCCTCGCGCGCTTCCCGCTGCGGATCCGTCTGCCGCAAAGCCGCGGCGGCCG
CGTTGCGCTCGCGCTCGTCTTCATCTATTTCGTCTGGGGTTCGACGTACAGCGGTCTGCATTTCGCGCTGCAGTCGTTCC
CGCCGCTGCTGCTGTCGGGGCTGCGCAACCTGCTCGGCGGGATCGGCCTGTTCGTCTTCGCGCTGCGCCGCAAGCCCGAA
TGGCCGACGCTCGTCGAGATCCGTAATGCGGCAATCGTCGGCACGATGCTCGTCGCGCTGTCGTCCGGCACGATCGCGCT
CGGGATGCGCACGGTCAGCAGCGGTTCGGCCGCGGTGATGGTCGCGACGGTGCCGCTGTTCGCGACCGTGATCGCGGCGG
TCGCCGGGCGGCGCGTGACGAAAGGCGAGTGGGCGGCCGTCGCGCTCGGGATGGTCGGGATCGTCGTGCTGAATTCGGGC
GGCGCCGCCGCCGAAAACTCGGCGCTCGGCACGATCAGCGTGCTGGCCGGCGCGCTGTTCTGGGCAGGCGGCGCGCATCT
CGCGACGCGGCTCAAACTGCCGTCCGACCTGTTTCTTTCGACGTCGCTGCAGATCGGCCTCGGCGGGCTGATGTCGACGC
TCGCCGCATGGCTGCTCGGCGAGCATGTCGAACACCTCGCGGTCGCGCCGGTGTTCGCGTTCGTCTATCTGATGGTGTTC
TGCACGATGGCCGCGTACGTCGCGTACGGCTATCTGATCCGGCACACGAGCCCGATCATCGCAAGCAGCTGCATGTACGT
GAATCCGATCGTCGCAGTCGCGCTCGGCGCGCTGATGCTCGGCGAGCCGGTGACGATGGCGACCGTCGTCGCGACCGTCG
CGATCCTCGGCAGCGTCGGGCTGTCGTTCCTGTTCGATCCGGCGCGTCGGCCCGCAGCGGCCGCGGCCGGTTCGCCGGTT
GCGGCTACTGCGTCGGCGTCGGCGTCTATGCCGGCGGCTGATGGTGCGCCGGCGTACGAGCCGATCGCAGTGCCCGTGCC
GGCCGCGATGCCGGACGTCGCGCCCGGTATGACGGCGACCGCCGTGCCGGCGGCGAGTGCGGTGGCGAATGCTGCGCCGG
ATGGCGCGGCGGTCGGTACAGCGGTAGCGGGTGCTGGCGTGGTCGATGCGGTGGTATCCGGCGCTGCAGCAGTCGATGCA
GCGGCGGCGCGCGAGGCGGTCGTTGGTGCTGAGGCAGTCGGTGCAGCGGTAGCCGGCGAAGCAGTCGTTGATGCTGCGGC
AGTCGGTGCAGCGGTAGGGGGCGCAGCGGTCGTTGATGCAGCGGCAACCTATGCGGCGGCAGCCGGTGCTGCAGCGGTCG
ACTCAGCGACGGCCGGCACAGCGGCAGTCGATGCAGCAGCACCCCGCGCGGCGACGCCCGATACGTTGTCGCCACTCGCG
TCGCGGCCTGCACGCGAGTCCTCACCGCAGCGCGCGGACGCGTAA

Upstream 100 bases:

>100_bases
GCACGTCCGCTTTCGCTTTCCCGGCCCTGTCAGGGCCGCTTGCCGGCGTCGCCGGCGTCTTTCGGCGGAGCACGCGGCGC
GACGTGCGGGCGGTCAGGCC

Downstream 100 bases:

>100_bases
CGACGCCCGCCGCGCGCGCGGCGCTCAGCCGCGCTTGCCGCCGACGTAGTGGAACACGCCGGCGAGCGCGGTAAACAGCA
GTCCGGCGGCGCACATGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MTPLDRLLDFLARFPLRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSGLRNLLGGIGLFVFALRRKPE
WPTLVEIRNAAIVGTMLVALSSGTIALGMRTVSSGSAAVMVATVPLFATVIAAVAGRRVTKGEWAAVALGMVGIVVLNSG
GAAAENSALGTISVLAGALFWAGGAHLATRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGEHVEHLAVAPVFAFVYLMVF
CTMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVVATVAILGSVGLSFLFDPARRPAAAAAGSPV
AATASASASMPAADGAPAYEPIAVPVPAAMPDVAPGMTATAVPAASAVANAAPDGAAVGTAVAGAGVVDAVVSGAAAVDA
AAAREAVVGAEAVGAAVAGEAVVDAAAVGAAVGGAAVVDAAATYAAAAGAAAVDSATAGTAAVDAAAPRAATPDTLSPLA
SRPARESSPQRADA

Sequences:

>Translated_494_residues
MTPLDRLLDFLARFPLRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSGLRNLLGGIGLFVFALRRKPE
WPTLVEIRNAAIVGTMLVALSSGTIALGMRTVSSGSAAVMVATVPLFATVIAAVAGRRVTKGEWAAVALGMVGIVVLNSG
GAAAENSALGTISVLAGALFWAGGAHLATRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGEHVEHLAVAPVFAFVYLMVF
CTMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVVATVAILGSVGLSFLFDPARRPAAAAAGSPV
AATASASASMPAADGAPAYEPIAVPVPAAMPDVAPGMTATAVPAASAVANAAPDGAAVGTAVAGAGVVDAVVSGAAAVDA
AAAREAVVGAEAVGAAVAGEAVVDAAAVGAAVGGAAVVDAAATYAAAAGAAAVDSATAGTAAVDAAAPRAATPDTLSPLA
SRPARESSPQRADA
>Mature_493_residues
TPLDRLLDFLARFPLRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSGLRNLLGGIGLFVFALRRKPEW
PTLVEIRNAAIVGTMLVALSSGTIALGMRTVSSGSAAVMVATVPLFATVIAAVAGRRVTKGEWAAVALGMVGIVVLNSGG
AAAENSALGTISVLAGALFWAGGAHLATRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGEHVEHLAVAPVFAFVYLMVFC
TMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVVATVAILGSVGLSFLFDPARRPAAAAAGSPVA
ATASASASMPAADGAPAYEPIAVPVPAAMPDVAPGMTATAVPAASAVANAAPDGAAVGTAVAGAGVVDAVVSGAAAVDAA
AAREAVVGAEAVGAAVAGEAVVDAAAVGAAVGGAAVVDAAATYAAAAGAAAVDSATAGTAAVDAAAPRAATPDTLSPLAS
RPARESSPQRADA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=257, Percent_Identity=38.1322957198444, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 48741; Mature: 48610

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLDRLLDFLARFPLRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSG
CCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHH
LRNLLGGIGLFVFALRRKPEWPTLVEIRNAAIVGTMLVALSSGTIALGMRTVSSGSAAVM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEE
VATVPLFATVIAAVAGRRVTKGEWAAVALGMVGIVVLNSGGAAAENSALGTISVLAGALF
EHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHH
WAGGAHLATRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGEHVEHLAVAPVFAFVYLMVF
HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CTMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVVATVAILGSVG
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSFLFDPARRPAAAAAGSPVAATASASASMPAADGAPAYEPIAVPVPAAMPDVAPGMTAT
HHHHCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHH
AVPAASAVANAAPDGAAVGTAVAGAGVVDAVVSGAAAVDAAAAREAVVGAEAVGAAVAGE
HCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVDAAAVGAAVGGAAVVDAAATYAAAAGAAAVDSATAGTAAVDAAAPRAATPDTLSPLA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHH
SRPARESSPQRADA
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TPLDRLLDFLARFPLRIRLPQSRGGRVALALVFIYFVWGSTYSGLHFALQSFPPLLLSG
CHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHH
LRNLLGGIGLFVFALRRKPEWPTLVEIRNAAIVGTMLVALSSGTIALGMRTVSSGSAAVM
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEE
VATVPLFATVIAAVAGRRVTKGEWAAVALGMVGIVVLNSGGAAAENSALGTISVLAGALF
EHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHH
WAGGAHLATRLKLPSDLFLSTSLQIGLGGLMSTLAAWLLGEHVEHLAVAPVFAFVYLMVF
HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CTMAAYVAYGYLIRHTSPIIASSCMYVNPIVAVALGALMLGEPVTMATVVATVAILGSVG
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSFLFDPARRPAAAAAGSPVAATASASASMPAADGAPAYEPIAVPVPAAMPDVAPGMTAT
HHHHCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHH
AVPAASAVANAAPDGAAVGTAVAGAGVVDAVVSGAAAVDAAAAREAVVGAEAVGAAVAGE
HCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AVVDAAAVGAAVGGAAVVDAAATYAAAAGAAAVDSATAGTAAVDAAAPRAATPDTLSPLA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHH
SRPARESSPQRADA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]