Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is potF [C]
Identifier: 161525244
GI number: 161525244
Start: 2269227
End: 2270255
Strand: Direct
Name: potF [C]
Synonym: Bmul_2074
Alternate gene names: 161525244
Gene position: 2269227-2270255 (Clockwise)
Preceding gene: 161525243
Following gene: 161525245
Centisome position: 65.8
GC content: 65.31
Gene sequence:
>1029_bases GTGCCTTTCCGTCTGACCTCGCTGCTGCGCGCACTCGCCGCGCCGCTCGCCTGCGCCGCGCTCGTCGCCGGCGCGAACGC CGCTCGCGCCGATGAAACGGCGATCTGCTACAACTGTCCGCCCGAATGGGCCGACTGGGCCGCGCAGATCGCGGCGATCA AGCAGAAGACCGGCATCCGCGTGCCGTTCGACAACAAGAACTCGGGTCAGGCGATCGCGCAGCTGATCGCCGAACAGAAG AGCCCGGTCGCCGACGTCGTCTATCTCGGCGTCTCGTCCGCATTCCAGGCGAAGGACAAGGGCGTGATCGCGCCGTACAA GCCCGCGCACTGGAACGACATTCCGGCGAACCTGAAAGACCCGCAGGGCTACTGGTTCGCGATTCATTCGGGCACGCTCG GCTTCTTCGTCAACAAGGACGCGTTGGACGGCAAGCCGGTGCCGCGCTCATGGGCCGATCTGCTGAAGCCCGAATACAAG GGGATGGTCGGCTATCTCGATCCGTCGAGCGCGTTCGTCGGCTATGCGGGCGCGGTCGCCGTCAACCAGGCGCTCGGCGG CAGCCTCGACAACTTCAAGCCGGCGCTCGACTGGTTCCGCAAGCTGAAAGCGAACGCGCCGATCGTGCCGAAGCAGACCG CGTATGCGCGCGTGCTGTCGGGCGAGATCCCGATCCTCCTCGACTACGACTTCGACGCATACCGCGCGAAGTACAAGGAC AACGCGAACGTCGAGTTCGTGATCCCGAAGGAAGGTACGATCGCGGTGCCTTACGTGATGAGTCTCGTGAAGGGCGCGCC GCACGACGCGAACGGCAAAAAGGTGCTTGACTTCGTGCTGTCCGACGAAGGCCAGAAGCTGTGGGCGAACGCGTATCTTC GGCCGGTGCGCGCACAGATGCTGCCCGCCGACGTCGCGACGAAGTTCCTGCCCGCGAGCGACTATGCGCGCGCGAAGCCG GTCGACTTCGGCAAGATGGCGGCCGGCCAGCAGGCGTTCGGCCAGCAGTATCTGCAGGTGATGCAGTAA
Upstream 100 bases:
>100_bases GCAGACGTGCAACTGCGTCGCGCGTAAACCCGCGCACCGTGCGCCGCGTTCTTCATGCGGCGCGCGGCGACGTCCCCTTT CTTCGTCCGGAGACCTGATC
Downstream 100 bases:
>100_bases GCGCCGATGCTTGATCTGACTTTTCCGCTGCGCTGGCGCATCGCGCTCGTCGCGCCGGCGCTCGCGGTGTTCGCCGCATT CTGGCTGCTGCCGATGGCCG
Product: extracellular solute-binding protein
Products: ADP; phosphate; putrescine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPFRLTSLLRALAAPLACAALVAGANAARADETAICYNCPPEWADWAAQIAAIKQKTGIRVPFDNKNSGQAIAQLIAEQK SPVADVVYLGVSSAFQAKDKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPEYK GMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPKQTAYARVLSGEIPILLDYDFDAYRAKYKD NANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKVLDFVLSDEGQKLWANAYLRPVRAQMLPADVATKFLPASDYARAKP VDFGKMAAGQQAFGQQYLQVMQ
Sequences:
>Translated_342_residues MPFRLTSLLRALAAPLACAALVAGANAARADETAICYNCPPEWADWAAQIAAIKQKTGIRVPFDNKNSGQAIAQLIAEQK SPVADVVYLGVSSAFQAKDKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPEYK GMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPKQTAYARVLSGEIPILLDYDFDAYRAKYKD NANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKVLDFVLSDEGQKLWANAYLRPVRAQMLPADVATKFLPASDYARAKP VDFGKMAAGQQAFGQQYLQVMQ >Mature_341_residues PFRLTSLLRALAAPLACAALVAGANAARADETAICYNCPPEWADWAAQIAAIKQKTGIRVPFDNKNSGQAIAQLIAEQKS PVADVVYLGVSSAFQAKDKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPEYKG MVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPKQTAYARVLSGEIPILLDYDFDAYRAKYKDN ANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKVLDFVLSDEGQKLWANAYLRPVRAQMLPADVATKFLPASDYARAKPV DFGKMAAGQQAFGQQYLQVMQ
Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine. Polyamine Binding Protein. [C]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37082; Mature: 36951
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRLTSLLRALAAPLACAALVAGANAARADETAICYNCPPEWADWAAQIAAIKQKTGIR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC VPFDNKNSGQAIAQLIAEQKSPVADVVYLGVSSAFQAKDKGVIAPYKPAHWNDIPANLKD CCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC PQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPEYKGMVGYLDPSSAFVGYAGAVA CCCEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHCHHHCCEEEEECCCCCHHHHHHHHH VNQALGGSLDNFKPALDWFRKLKANAPIVPKQTAYARVLSGEIPILLDYDFDAYRAKYKD HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHCCC NANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKVLDFVLSDEGQKLWANAYLRPVRAQM CCCEEEEECCCCCEEHHHHHHHHHCCCCCCCCCEEEHEECCCCCCHHHHHHHHHHHHHHH LPADVATKFLPASDYARAKPVDFGKMAAGQQAFGQQYLQVMQ CCHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHC >Mature Secondary Structure PFRLTSLLRALAAPLACAALVAGANAARADETAICYNCPPEWADWAAQIAAIKQKTGIR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC VPFDNKNSGQAIAQLIAEQKSPVADVVYLGVSSAFQAKDKGVIAPYKPAHWNDIPANLKD CCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC PQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPEYKGMVGYLDPSSAFVGYAGAVA CCCEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHCHHHCCEEEEECCCCCHHHHHHHHH VNQALGGSLDNFKPALDWFRKLKANAPIVPKQTAYARVLSGEIPILLDYDFDAYRAKYKD HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHCCC NANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKVLDFVLSDEGQKLWANAYLRPVRAQM CCCEEEEECCCCCEEHHHHHHHHHCCCCCCCCCEEEHEECCCCCCHHHHHHHHHHHHHHH LPADVATKFLPASDYARAKPVDFGKMAAGQQAFGQQYLQVMQ CCHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; putrescine [Periplasm]; H2O [C]
Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]
General reaction: Polyamine Binding Protein [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]