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The map label for this gene is ygeR [H]

Identifier: 161525160

GI number: 161525160

Start: 2187487

End: 2188206

Strand: Direct

Name: ygeR [H]

Synonym: Bmul_1990

Alternate gene names: 161525160

Gene position: 2187487-2188206 (Clockwise)

Preceding gene: 161525159

Following gene: 161525162

Centisome position: 63.43

GC content: 68.19

Gene sequence:

>720_bases
ATGCGCGGCAGCGTTTTGCGAGGTTCAATGTTCGGAACAACAACGAAACGACTCATCGCGGCCGGCTGCGCCGCCCTGCT
CGTCGCGTGCGGCTCCGCGCCGGTCGGCCCCGGTTTCTACCGCGTCGAGCGCGGCGATACGCTGTACAAGATCGCGCGCG
CCAACCGCCAGTCCGTCCAGAACATCGTCCGCTGGAACCAGATCTCGAATCCGGACGCGATCGAAGTCGGCCAGGTGCTG
CGCGTCGCGCCGCCGCCCGGCACGACGACCGCGTCGACGACGGGCACCGGCACGGCCGGCCGCAGCCGTCCCGCCCCTTC
CGCACCGGTGGAATCGGCCGTGAAGCCGGCCACGAGCATCTCGCTCGTCTGGCCTGCGCCGGGCAGCGTGATCCGCAGTT
TCGACGGCGCGAAATCGAAAGGCATCGACATCGCGAATAGCGCGGGCACGCCGGTGGTGGCGGCCGCGCCGGGTGTCGTC
GTGTATGCCGGCAACGGCTTGCGCGGCTACGGCAATCTGATCATCCTGAAGCACAACGCCGATTACCTGACCGCGTACGC
GCACAATCGCGCGCTGCTCGTGAAGGAAGGTCAGTCGGTCGCACAGGGGCAGACGATTGCCGAGATGGGCGATAGCGACA
GCGACCGCGTCGCGCTGCATTTCGAACTGCGCTACGGCGGCCGTTCGATCGATCCGGCGCGCTATCTGCCGGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCTGCGTCGCACGGCTGCCGAGCACGCCCGCGCCCGCCCAAACTGCGGTGCGCGGGTCGAACCCGTTAAAATCTGACGT
TTTGTGTCGCCTGCCGCGTG

Downstream 100 bases:

>100_bases
GCACCGGCCGGCCCGTACGCGATGCAATGCGCATCGCGTGCGTTGCCGTCCGCGATCGGGACAAGTCGAGTCAGCGTTTG
CGCAGACGTCCGGTGAAACG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRGSVLRGSMFGTTTKRLIAAGCAALLVACGSAPVGPGFYRVERGDTLYKIARANRQSVQNIVRWNQISNPDAIEVGQVL
RVAPPPGTTTASTTGTGTAGRSRPAPSAPVESAVKPATSISLVWPAPGSVIRSFDGAKSKGIDIANSAGTPVVAAAPGVV
VYAGNGLRGYGNLIILKHNADYLTAYAHNRALLVKEGQSVAQGQTIAEMGDSDSDRVALHFELRYGGRSIDPARYLPAR

Sequences:

>Translated_239_residues
MRGSVLRGSMFGTTTKRLIAAGCAALLVACGSAPVGPGFYRVERGDTLYKIARANRQSVQNIVRWNQISNPDAIEVGQVL
RVAPPPGTTTASTTGTGTAGRSRPAPSAPVESAVKPATSISLVWPAPGSVIRSFDGAKSKGIDIANSAGTPVVAAAPGVV
VYAGNGLRGYGNLIILKHNADYLTAYAHNRALLVKEGQSVAQGQTIAEMGDSDSDRVALHFELRYGGRSIDPARYLPAR
>Mature_239_residues
MRGSVLRGSMFGTTTKRLIAAGCAALLVACGSAPVGPGFYRVERGDTLYKIARANRQSVQNIVRWNQISNPDAIEVGQVL
RVAPPPGTTTASTTGTGTAGRSRPAPSAPVESAVKPATSISLVWPAPGSVIRSFDGAKSKGIDIANSAGTPVVAAAPGVV
VYAGNGLRGYGNLIILKHNADYLTAYAHNRALLVKEGQSVAQGQTIAEMGDSDSDRVALHFELRYGGRSIDPARYLPAR

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082174, Length=224, Percent_Identity=45.9821428571429, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1789099, Length=257, Percent_Identity=36.5758754863813, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI87082297, Length=120, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 24870; Mature: 24870

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSVLRGSMFGTTTKRLIAAGCAALLVACGSAPVGPGFYRVERGDTLYKIARANRQSVQ
CCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEHHHCCHHHHH
NIVRWNQISNPDAIEVGQVLRVAPPPGTTTASTTGTGTAGRSRPAPSAPVESAVKPATSI
HHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEE
SLVWPAPGSVIRSFDGAKSKGIDIANSAGTPVVAAAPGVVVYAGNGLRGYGNLIILKHNA
EEEECCCHHHHHHCCCCCCCCCEEECCCCCCEEEECCCEEEECCCCCCCCCCEEEEEECC
DYLTAYAHNRALLVKEGQSVAQGQTIAEMGDSDSDRVALHFELRYGGRSIDPARYLPAR
CEEEEEECCEEEEEECCCCHHCCCHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRGSVLRGSMFGTTTKRLIAAGCAALLVACGSAPVGPGFYRVERGDTLYKIARANRQSVQ
CCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEHHHCCHHHHH
NIVRWNQISNPDAIEVGQVLRVAPPPGTTTASTTGTGTAGRSRPAPSAPVESAVKPATSI
HHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEE
SLVWPAPGSVIRSFDGAKSKGIDIANSAGTPVVAAAPGVVVYAGNGLRGYGNLIILKHNA
EEEECCCHHHHHHCCCCCCCCCEEECCCCCCEEEECCCEEEECCCCCCCCCCEEEEEECC
DYLTAYAHNRALLVKEGQSVAQGQTIAEMGDSDSDRVALHFELRYGGRSIDPARYLPAR
CEEEEEECCEEEEEECCCCHHCCCHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]