| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is ybjZ [C]
Identifier: 161525121
GI number: 161525121
Start: 2137215
End: 2138642
Strand: Reverse
Name: ybjZ [C]
Synonym: Bmul_1949
Alternate gene names: 161525121
Gene position: 2138642-2137215 (Counterclockwise)
Preceding gene: 161525122
Following gene: 161525120
Centisome position: 62.02
GC content: 71.22
Gene sequence:
>1428_bases ATGACCGCGACGCTGATGCTCGCGCTGCGCAACCTGCAGCGCAACCGACGCCGTTCGCTGACCACGCTGCTCGCGATGAT CGTCGGCGTGAGCGCGATCCTGCTGTTCGGCGGCTTCAGCCGCGACATCACGCTCGGGCTGCAGACCGATTTCGTGCAGC GCAGCGGCCATCTGCAGATCCAGCGGCGCGGCTATTTCCTGTACGGAACCGGCGACCCGGCCGCGTACGGCATTCGCGAC TACGCGGCGTTGATCGACACGCTGCGGCGCGATGCACAGCTCGCGCCGCTCGTCGCGGTCGTGACGCCGACGCTGCAGTT CGGCGGGATCGCCGGCAATTTCGAGGCGGGCGTGTCGCGTACCGTGATCGGCTTCGGCACGCTGCCGGACGACCAGTACC GCATGCAGCAATGGAACGCGTACGGCTTTCCGCTGCAGCCGCGCGCGTTCGCACTGCGCGGCGCGCCGGACGACGCGGCC GTGGTCGGCGTCGGCGTGGCGCGCGTGCTGCATCTGTGCGCGGCGCTGCGCGTGCGCGATTGCCGCGACGCACCGGCCGG GCCGGCCGCACTCGACGCCGCCGCGCACGGTAGCGACGGCGGCGACGCCGAGCATGCGCCGGCCGACGTCCTCGCGCTCG CTCACGACGAAGCGCGCAGCCGGCCGGCCGAGCGCGACGGTGCGCACGTCGAAGTGCTCGCCGCGAGCGCGGGCGGTGCG CCGAACGTCGGCCGCTTCTCGGTCGTGAAGGCCGAGCAGCAGGGCGTGAAGGAATTCGACGATGCGTATCTCGCCGTGCG GCTGCCGCTCGCGCAGCGGCTCGTCTACGGCGGCGCGGCGCCGCGCGCGACCGCGATCGAGATCCAGCTGCACGAGACGG CCGACCTGCCGGCCGCACGCGCGCGCATCGAGCAGCTGCTGCGCGACGGCTATCGCGGGCAGCCGCTCGAGGTCGTCGAT TTCGCGACGCTCAATCCGTTCTACGACCAGACGAACCGGATGTTCTCGGTGATCTTCGGCTTCGTGTTCGTGCTGATCAG CGCGATCGTGCTGTTCGTGATCAGCAACACGATGAGCACCGCGATCATCGAACGCACCGTCGAAATCGGCACGCTGCGCG CGATGGGCATGCGGCGCGGCGGCATCCAGACGCTGTTCGTCTGCGAGGGCGCGCTGCTCGGCATTGCGGGCGCGACGCTC GGCGTGCTGGTCGCGCTTGCGATCGCCGCCGCGATCAACCGCAGCGGGCTCGTATGGACGCCGCCCGCGCGCATCGATGC GGTCGCGCTGACCGTGCGCGTGTGGGGCGAGTGGCGAACCATCGCGCTGACCTTCGCGGGGCTCGCGTGCGTCGCCGGAT TGTCGGCGTGGCTGCCGGCGCGTCATGCGGCGCGGCTGTCGATCGTCGACGCGCTGCGCCACGTATGA
Upstream 100 bases:
>100_bases AGATCGTGCAGGCGGCCGACGAGGTCGTGCGGATACGCGACGGCCGTATCGTCGGCTACGAACTCGCGGCCGGCCGCGCG ACGCCCATGGAGGCGCGCCG
Downstream 100 bases:
>100_bases AGCCGTTTTGATCCCCTTCATCCATCGGAGAGTATTCGTGCGCCGTCTGTTCGGTTTCCTCTGTTTGAGTCTTTCGTTGC TGGCCGGCATCGTGCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MTATLMLALRNLQRNRRRSLTTLLAMIVGVSAILLFGGFSRDITLGLQTDFVQRSGHLQIQRRGYFLYGTGDPAAYGIRD YAALIDTLRRDAQLAPLVAVVTPTLQFGGIAGNFEAGVSRTVIGFGTLPDDQYRMQQWNAYGFPLQPRAFALRGAPDDAA VVGVGVARVLHLCAALRVRDCRDAPAGPAALDAAAHGSDGGDAEHAPADVLALAHDEARSRPAERDGAHVEVLAASAGGA PNVGRFSVVKAEQQGVKEFDDAYLAVRLPLAQRLVYGGAAPRATAIEIQLHETADLPAARARIEQLLRDGYRGQPLEVVD FATLNPFYDQTNRMFSVIFGFVFVLISAIVLFVISNTMSTAIIERTVEIGTLRAMGMRRGGIQTLFVCEGALLGIAGATL GVLVALAIAAAINRSGLVWTPPARIDAVALTVRVWGEWRTIALTFAGLACVAGLSAWLPARHAARLSIVDALRHV
Sequences:
>Translated_475_residues MTATLMLALRNLQRNRRRSLTTLLAMIVGVSAILLFGGFSRDITLGLQTDFVQRSGHLQIQRRGYFLYGTGDPAAYGIRD YAALIDTLRRDAQLAPLVAVVTPTLQFGGIAGNFEAGVSRTVIGFGTLPDDQYRMQQWNAYGFPLQPRAFALRGAPDDAA VVGVGVARVLHLCAALRVRDCRDAPAGPAALDAAAHGSDGGDAEHAPADVLALAHDEARSRPAERDGAHVEVLAASAGGA PNVGRFSVVKAEQQGVKEFDDAYLAVRLPLAQRLVYGGAAPRATAIEIQLHETADLPAARARIEQLLRDGYRGQPLEVVD FATLNPFYDQTNRMFSVIFGFVFVLISAIVLFVISNTMSTAIIERTVEIGTLRAMGMRRGGIQTLFVCEGALLGIAGATL GVLVALAIAAAINRSGLVWTPPARIDAVALTVRVWGEWRTIALTFAGLACVAGLSAWLPARHAARLSIVDALRHV >Mature_474_residues TATLMLALRNLQRNRRRSLTTLLAMIVGVSAILLFGGFSRDITLGLQTDFVQRSGHLQIQRRGYFLYGTGDPAAYGIRDY AALIDTLRRDAQLAPLVAVVTPTLQFGGIAGNFEAGVSRTVIGFGTLPDDQYRMQQWNAYGFPLQPRAFALRGAPDDAAV VGVGVARVLHLCAALRVRDCRDAPAGPAALDAAAHGSDGGDAEHAPADVLALAHDEARSRPAERDGAHVEVLAASAGGAP NVGRFSVVKAEQQGVKEFDDAYLAVRLPLAQRLVYGGAAPRATAIEIQLHETADLPAARARIEQLLRDGYRGQPLEVVDF ATLNPFYDQTNRMFSVIFGFVFVLISAIVLFVISNTMSTAIIERTVEIGTLRAMGMRRGGIQTLFVCEGALLGIAGATLG VLVALAIAAAINRSGLVWTPPARIDAVALTVRVWGEWRTIALTFAGLACVAGLSAWLPARHAARLSIVDALRHV
Specific function: Unknown
COG id: COG4591
COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 50706; Mature: 50575
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLMLALRNLQRNRRRSLTTLLAMIVGVSAILLFGGFSRDITLGLQTDFVQRSGHLQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCEEE QRRGYFLYGTGDPAAYGIRDYAALIDTLRRDAQLAPLVAVVTPTLQFGGIAGNFEAGVSR EECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCHHHCCCCCCCCCCCCE TVIGFGTLPDDQYRMQQWNAYGFPLQPRAFALRGAPDDAAVVGVGVARVLHLCAALRVRD EEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH CRDAPAGPAALDAAAHGSDGGDAEHAPADVLALAHDEARSRPAERDGAHVEVLAASAGGA CCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHEEECHHHHCCCCCCCCCEEEEEEECCCCC PNVGRFSVVKAEQQGVKEFDDAYLAVRLPLAQRLVYGGAAPRATAIEIQLHETADLPAAR CCCCCEEEEECHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHH ARIEQLLRDGYRGQPLEVVDFATLNPFYDQTNRMFSVIFGFVFVLISAIVLFVISNTMST HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIIERTVEIGTLRAMGMRRGGIQTLFVCEGALLGIAGATLGVLVALAIAAAINRSGLVWT HHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC PPARIDAVALTVRVWGEWRTIALTFAGLACVAGLSAWLPARHAARLSIVDALRHV CCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TATLMLALRNLQRNRRRSLTTLLAMIVGVSAILLFGGFSRDITLGLQTDFVQRSGHLQI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCEEE QRRGYFLYGTGDPAAYGIRDYAALIDTLRRDAQLAPLVAVVTPTLQFGGIAGNFEAGVSR EECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCHHHCCCCCCCCCCCCE TVIGFGTLPDDQYRMQQWNAYGFPLQPRAFALRGAPDDAAVVGVGVARVLHLCAALRVRD EEEEECCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH CRDAPAGPAALDAAAHGSDGGDAEHAPADVLALAHDEARSRPAERDGAHVEVLAASAGGA CCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHEEECHHHHCCCCCCCCCEEEEEEECCCCC PNVGRFSVVKAEQQGVKEFDDAYLAVRLPLAQRLVYGGAAPRATAIEIQLHETADLPAAR CCCCCEEEEECHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHH ARIEQLLRDGYRGQPLEVVDFATLNPFYDQTNRMFSVIFGFVFVLISAIVLFVISNTMST HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIIERTVEIGTLRAMGMRRGGIQTLFVCEGALLGIAGATLGVLVALAIAAAINRSGLVWT HHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC PPARIDAVALTVRVWGEWRTIALTFAGLACVAGLSAWLPARHAARLSIVDALRHV CCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]