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The map label for this gene is ompR [H]

Identifier: 161525112

GI number: 161525112

Start: 2127240

End: 2127968

Strand: Reverse

Name: ompR [H]

Synonym: Bmul_1940

Alternate gene names: 161525112

Gene position: 2127968-2127240 (Counterclockwise)

Preceding gene: 161525113

Following gene: 161525111

Centisome position: 61.71

GC content: 70.37

Gene sequence:

>729_bases
ATGGGTGCGGTACTGATCGTCGATCCGGACGGCCACACCCGCGAGGCGCTCGGCGCGCTGCTGCGCGGCTGTCAGATCGA
CGCGTCGACGCTCGCCGACGTGTCGTTGCTGACGGCCCGCGTGACGGAAGCGCCGCCCGCGGTGATCGTGCTGCGCGTCG
CGCACGCGGCCGTCGATGCGCATGCGGTGCTCGGCGCATTGCGTGCCGCCGGCCACGACATGCCGGTGCTCGTGCTGAGC
CGGTCGCGCGATGTCGTCGACAAGGTTGTCGCGCTCGAGATAGGCGCGGACGACTATTTGGTCGATCCGTTCGAGCCGAT
GGAACTCGTTGCGCGCGTGCGCAGCGCGCTTCGCCGCTATCGGACACGACGGCCGGCGGTGCCGCGGCCCGATACGCGGC
CGCCCTATACGTTCGGCGGCATCGCCGTCGATTTCGAGAACCGGCGTGCGACGCGCGCGGGCCGCGATCTCGGTCTGCGC
GACAGCGAATTCGCGCTGCTCGACGTGTTCGTGTCGCGGCCGATGTGCGTGCTGTCGCGCAGCGAGATCCTCGCGCTGCT
CGGTCCGCGCGCGGCGGCGAAGTCCGAGCGCGGGCTCGACGTGCTGGTGTTCCGGCTGCGCGGGCTGATCGAGAACGCGG
TCGGCAGCTATCGCTATATCCGCACCGTGCGCGGCAAGGGCTACATGTTCGTGCCGCTCGGCACGCTGGCGGACGATGAC
GTGCGTTGA

Upstream 100 bases:

>100_bases
GATTGCTGCACGCAAGCACGATGACGCAGGCGATGCGACAGCCCGTTGCGCTTGACGCAGCGACGGTGCGGGGCGCCGCG
TTCGTCTGCGCAGGGGCGCG

Downstream 100 bases:

>100_bases
CCGCATTGCCGGTGCGGTAACATGCGGACGGCTTGGCGCGCGGCAAGCGGCGTGCGGCACGCAAGCCCAATCGGACAAGG
AGAAATCGATGAAGCGAACG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MGAVLIVDPDGHTREALGALLRGCQIDASTLADVSLLTARVTEAPPAVIVLRVAHAAVDAHAVLGALRAAGHDMPVLVLS
RSRDVVDKVVALEIGADDYLVDPFEPMELVARVRSALRRYRTRRPAVPRPDTRPPYTFGGIAVDFENRRATRAGRDLGLR
DSEFALLDVFVSRPMCVLSRSEILALLGPRAAAKSERGLDVLVFRLRGLIENAVGSYRYIRTVRGKGYMFVPLGTLADDD
VR

Sequences:

>Translated_242_residues
MGAVLIVDPDGHTREALGALLRGCQIDASTLADVSLLTARVTEAPPAVIVLRVAHAAVDAHAVLGALRAAGHDMPVLVLS
RSRDVVDKVVALEIGADDYLVDPFEPMELVARVRSALRRYRTRRPAVPRPDTRPPYTFGGIAVDFENRRATRAGRDLGLR
DSEFALLDVFVSRPMCVLSRSEILALLGPRAAAKSERGLDVLVFRLRGLIENAVGSYRYIRTVRGKGYMFVPLGTLADDD
VR
>Mature_241_residues
GAVLIVDPDGHTREALGALLRGCQIDASTLADVSLLTARVTEAPPAVIVLRVAHAAVDAHAVLGALRAAGHDMPVLVLSR
SRDVVDKVVALEIGADDYLVDPFEPMELVARVRSALRRYRTRRPAVPRPDTRPPYTFGGIAVDFENRRATRAGRDLGLRD
SEFALLDVFVSRPMCVLSRSEILALLGPRAAAKSERGLDVLVFRLRGLIENAVGSYRYIRTVRGKGYMFVPLGTLADDDV
R

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786784, Length=188, Percent_Identity=37.2340425531915, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=27.7533039647577, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=27.9475982532751, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=27.1186440677966, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI2367329, Length=170, Percent_Identity=31.7647058823529, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790552, Length=235, Percent_Identity=30.6382978723404, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1787229, Length=156, Percent_Identity=35.2564102564103, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786911, Length=235, Percent_Identity=32.7659574468085, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789402, Length=185, Percent_Identity=32.4324324324324, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787375, Length=229, Percent_Identity=27.0742358078603, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790860, Length=183, Percent_Identity=30.6010928961749, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082012, Length=185, Percent_Identity=30.2702702702703, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI145693140, Length=194, Percent_Identity=28.3505154639175, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26348; Mature: 26217

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAVLIVDPDGHTREALGALLRGCQIDASTLADVSLLTARVTEAPPAVIVLRVAHAAVDA
CCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH
HAVLGALRAAGHDMPVLVLSRSRDVVDKVVALEIGADDYLVDPFEPMELVARVRSALRRY
HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHEEECCCCCEECCCCHHHHHHHHHHHHHHH
RTRRPAVPRPDTRPPYTFGGIAVDFENRRATRAGRDLGLRDSEFALLDVFVSRPMCVLSR
HHCCCCCCCCCCCCCEEECCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHH
SEILALLGPRAAAKSERGLDVLVFRLRGLIENAVGSYRYIRTVRGKGYMFVPLGTLADDD
HHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHCHHEEEEEECCCCEEEEEECCCCCCC
VR
CC
>Mature Secondary Structure 
GAVLIVDPDGHTREALGALLRGCQIDASTLADVSLLTARVTEAPPAVIVLRVAHAAVDA
CEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHH
HAVLGALRAAGHDMPVLVLSRSRDVVDKVVALEIGADDYLVDPFEPMELVARVRSALRRY
HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHEEECCCCCEECCCCHHHHHHHHHHHHHHH
RTRRPAVPRPDTRPPYTFGGIAVDFENRRATRAGRDLGLRDSEFALLDVFVSRPMCVLSR
HHCCCCCCCCCCCCCEEECCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHH
SEILALLGPRAAAKSERGLDVLVFRLRGLIENAVGSYRYIRTVRGKGYMFVPLGTLADDD
HHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHCHHEEEEEECCCCEEEEEECCCCCCC
VR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]