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The map label for this gene is pupB [H]

Identifier: 161525105

GI number: 161525105

Start: 2119375

End: 2121966

Strand: Reverse

Name: pupB [H]

Synonym: Bmul_1933

Alternate gene names: 161525105

Gene position: 2121966-2119375 (Counterclockwise)

Preceding gene: 161525106

Following gene: 161525104

Centisome position: 61.53

GC content: 69.02

Gene sequence:

>2592_bases
ATGGGAAATGAAAGCCGCACCGGCCCATCGTTTACCGACTTCTCGATCATGGTTTCCATCCGTCTCATGCCGCGGCGCCG
TCCGGCGTCCGCCCGCCACACGCGGCGCACGATCGTGCCCGCCGCGCCGAACCGCGTCGCGCACCGGCTTGCCGGCGCCG
TCCTGCTGTCCGCGCTGCTGCCGTTGCCCGCGCTCGCCGATGCCGACACCGACGCGGCCGCCGCCGCGCCGCGCACGTCG
CGCCGCGCATTCGACGTGCCGGCCGGGCCGCTCGAAGCGACGCTGAACCGGTTCGGCCGCGACGCCGGCCTGCTGATCGC
GTTTCCGCCTGAGCTGACCGCCGGCCTGTCGAGCGGCGGCGTGCACGGCCGCTTCGACGTCGACGATGCGCTCGCGCGCG
TGCTCGCGGGCACTGGCCTCGTCGCGCTGCGTCAGTCGGGCGGCGGCTATACGTTGATGCGCGCGAACGGCGCGAACGGC
GCGAACGGCATGAGCGGTGCCGCCGTGCCGGCGCCGTCGGCCGATACGGCGGCCGAACTGCCGACGATCGCGGTGCGCAG
CAGCGCGCTGCGCGCGCAAAGCTACCGGCCGCCGAAGGAGGCGGGCGTGCTGCGCGCCGATATCCCGGTGCTCGATACCG
CGCAGGCCGTCAACGTCGTGCCGGCGCAGGTGCTGCGCGACCAGCGTCCGCGCAACCTCGACGACGCGCTCGGCAACGTC
AGCGGCATCACGCAGGGCAACACGCTCGCGGGCACGCAGGACACGATCATGAAGCGCGGCTTCGGCGACAACCGCGACGG
CTCGGTCATGCACAACGGCATGCCGATCGTGCAGGGGCGCTCGTTCAACGCCGCCGTCGACAGCGTCGAGGTGCTGAAGG
GGCCGACCTCGCTGCTGTACGGGCTGATGGACCCGGGCGGCGTCGTCAACGTCGTCAGCAAGCAGCCGCAGCTCACGCGC
TACAACGCGGTTTCGCTCGGCGCATCGACGTTCGGGCACGGCAAGAACGGCGGCAGCGCGACGTTCGATTCGACCGGGCC
GATCGGCGATTCGCGGCTCGCGTACCGGCTGATCGTCGACCAGTCGAACGAGCAGTACTGGCGCAATTTCGGCGAATACC
GGCAGACCTTCGTCGCGCCGTCGCTCGCGTGGTACGGCCGCGACACGCAGGTCGTGGTGTCGTACGAGTACCGCAAGTTC
CACTCGCCGTTCGATCGCGGCACGGCGCTCGATCCGCGCACCAACGCGCCGCTCGACATTCCCGCGCGGCGGCGCATCGA
CGAGCCGTTCAACAACATGGACGGCGAATCGCATCTCGCCCAGCTGAGCGTCGATCACCAGTTCAACGCGGACTGGAGCG
CGCATTTCGGCTACAGCTACAACCGCGAAACCTACGATGCGAACCAGCTGCGCACGACGGGCGTCGATCCGGTGACGGGT
ACGCTGTCGCGCAGCAACGACGCGACGCACGGCTCGCTGAGCACCGACAGCTACGGGATCGGCTACGTGAACGGCAAGCT
GACGCTCGCGGGGATGCGGCACGACGTGCAGGTCGGCTTCGACACCGAGTACCGCCGCATCTATCGCAAGGACATGCTGC
GGCAGGCGGTGAAGACGCCGTTCAGCTACGTCGATCCCGTGTACGGGCTGCTGCCGCCGTCGAGCACGGTGTCGGCGAGC
GACAGCGACCAGACCGACGCGCTGCACGACGCGTCCGCGTTTCTGCAGGACACGATTCATCTGACCGACAAGTGGATCGT
CTCGGGCGGCGTGCGCTATATCACGTACAACCAGGTCGCGGGGCGCGGCCGGCCGTTTCATGCGAACACCGATCTGAGCG
GCTCGCGCTGGCTGCCGCGCGCGGGCATCGTCTACAAGTGGACCGATAGCTTCTCGCTGTACGGCAGCTATTCGCAGTCG
CTGAAGCCGTCGTCGTCGATCGCGCCGATGGCGTCCGGCTACGTGATCGACGCCGCGACGCCGCCGGAGCAGGCGACCGC
GTGGGAGGTCGGCGGCAAGCTCGACCTGCCGGGCGGCATCACGGGCACGCTCGCGCTGTTCGACATCGACAAGAAGAACG
TGCTCGTCTCGCAGTTCAACGACGCGACGAAGCTGACCGACTGGCGCACGTCGGGCAAGGCGCGCTCGCGCGGCGTCGAG
CTCGACGTGTCGGGCCGCATCGGCGAACGCGTGAACGTGATCGCGAGCTACGCGTACATCGACGCGAAGACGATCGAGGA
TCCGCTGTACGCCGGCAACCGGCTGTGGAACGTCGCGCGTCACACCGCGTCGCTCGCGGCCGTGTACGACGTGGGCACGC
TCGCGGGCGGCGACGATCTGCGCATCGGTGCGGCTGCACGCTATGTCGGCGCACGGCCCGGCGATTCGGCGAACAGCTTC
ACGCTGCCGTCGTACGTGCTCGCCGACGCGTTCGCAACCTACGACACGCGGCTCGGCAAGCAGAAGCTGTCGTTCCAGCT
GAACGTGAAGAACCTGTTCAACCGCACGTACTACCCGTCGAGCGCGAACCGCTACTTCGTCGCGATCGGCGACGCGCGGC
AGGTGTCGCTGCTGACCACGCTGCAGTTCTGA

Upstream 100 bases:

>100_bases
GCTACGTGACGCGCTACTGGGCGACCGTCGTGCCGGCCCGTTCGTGACCGCGCGAAAAATTTTCGGGCCGGCGTGAGCCA
TTTCGCGGTCGTCGCGTGAC

Downstream 100 bases:

>100_bases
TCTTGCAACCGGCGCGCGCATCGTCGCGCGCGCCACGCCGGAGTCGATCCCGATGAAACCGAATACGAACCTGTGCGCAC
CGCGCCGCCTCGTCGATCGT

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 863; Mature: 862

Protein sequence:

>863_residues
MGNESRTGPSFTDFSIMVSIRLMPRRRPASARHTRRTIVPAAPNRVAHRLAGAVLLSALLPLPALADADTDAAAAAPRTS
RRAFDVPAGPLEATLNRFGRDAGLLIAFPPELTAGLSSGGVHGRFDVDDALARVLAGTGLVALRQSGGGYTLMRANGANG
ANGMSGAAVPAPSADTAAELPTIAVRSSALRAQSYRPPKEAGVLRADIPVLDTAQAVNVVPAQVLRDQRPRNLDDALGNV
SGITQGNTLAGTQDTIMKRGFGDNRDGSVMHNGMPIVQGRSFNAAVDSVEVLKGPTSLLYGLMDPGGVVNVVSKQPQLTR
YNAVSLGASTFGHGKNGGSATFDSTGPIGDSRLAYRLIVDQSNEQYWRNFGEYRQTFVAPSLAWYGRDTQVVVSYEYRKF
HSPFDRGTALDPRTNAPLDIPARRRIDEPFNNMDGESHLAQLSVDHQFNADWSAHFGYSYNRETYDANQLRTTGVDPVTG
TLSRSNDATHGSLSTDSYGIGYVNGKLTLAGMRHDVQVGFDTEYRRIYRKDMLRQAVKTPFSYVDPVYGLLPPSSTVSAS
DSDQTDALHDASAFLQDTIHLTDKWIVSGGVRYITYNQVAGRGRPFHANTDLSGSRWLPRAGIVYKWTDSFSLYGSYSQS
LKPSSSIAPMASGYVIDAATPPEQATAWEVGGKLDLPGGITGTLALFDIDKKNVLVSQFNDATKLTDWRTSGKARSRGVE
LDVSGRIGERVNVIASYAYIDAKTIEDPLYAGNRLWNVARHTASLAAVYDVGTLAGGDDLRIGAAARYVGARPGDSANSF
TLPSYVLADAFATYDTRLGKQKLSFQLNVKNLFNRTYYPSSANRYFVAIGDARQVSLLTTLQF

Sequences:

>Translated_863_residues
MGNESRTGPSFTDFSIMVSIRLMPRRRPASARHTRRTIVPAAPNRVAHRLAGAVLLSALLPLPALADADTDAAAAAPRTS
RRAFDVPAGPLEATLNRFGRDAGLLIAFPPELTAGLSSGGVHGRFDVDDALARVLAGTGLVALRQSGGGYTLMRANGANG
ANGMSGAAVPAPSADTAAELPTIAVRSSALRAQSYRPPKEAGVLRADIPVLDTAQAVNVVPAQVLRDQRPRNLDDALGNV
SGITQGNTLAGTQDTIMKRGFGDNRDGSVMHNGMPIVQGRSFNAAVDSVEVLKGPTSLLYGLMDPGGVVNVVSKQPQLTR
YNAVSLGASTFGHGKNGGSATFDSTGPIGDSRLAYRLIVDQSNEQYWRNFGEYRQTFVAPSLAWYGRDTQVVVSYEYRKF
HSPFDRGTALDPRTNAPLDIPARRRIDEPFNNMDGESHLAQLSVDHQFNADWSAHFGYSYNRETYDANQLRTTGVDPVTG
TLSRSNDATHGSLSTDSYGIGYVNGKLTLAGMRHDVQVGFDTEYRRIYRKDMLRQAVKTPFSYVDPVYGLLPPSSTVSAS
DSDQTDALHDASAFLQDTIHLTDKWIVSGGVRYITYNQVAGRGRPFHANTDLSGSRWLPRAGIVYKWTDSFSLYGSYSQS
LKPSSSIAPMASGYVIDAATPPEQATAWEVGGKLDLPGGITGTLALFDIDKKNVLVSQFNDATKLTDWRTSGKARSRGVE
LDVSGRIGERVNVIASYAYIDAKTIEDPLYAGNRLWNVARHTASLAAVYDVGTLAGGDDLRIGAAARYVGARPGDSANSF
TLPSYVLADAFATYDTRLGKQKLSFQLNVKNLFNRTYYPSSANRYFVAIGDARQVSLLTTLQF
>Mature_862_residues
GNESRTGPSFTDFSIMVSIRLMPRRRPASARHTRRTIVPAAPNRVAHRLAGAVLLSALLPLPALADADTDAAAAAPRTSR
RAFDVPAGPLEATLNRFGRDAGLLIAFPPELTAGLSSGGVHGRFDVDDALARVLAGTGLVALRQSGGGYTLMRANGANGA
NGMSGAAVPAPSADTAAELPTIAVRSSALRAQSYRPPKEAGVLRADIPVLDTAQAVNVVPAQVLRDQRPRNLDDALGNVS
GITQGNTLAGTQDTIMKRGFGDNRDGSVMHNGMPIVQGRSFNAAVDSVEVLKGPTSLLYGLMDPGGVVNVVSKQPQLTRY
NAVSLGASTFGHGKNGGSATFDSTGPIGDSRLAYRLIVDQSNEQYWRNFGEYRQTFVAPSLAWYGRDTQVVVSYEYRKFH
SPFDRGTALDPRTNAPLDIPARRRIDEPFNNMDGESHLAQLSVDHQFNADWSAHFGYSYNRETYDANQLRTTGVDPVTGT
LSRSNDATHGSLSTDSYGIGYVNGKLTLAGMRHDVQVGFDTEYRRIYRKDMLRQAVKTPFSYVDPVYGLLPPSSTVSASD
SDQTDALHDASAFLQDTIHLTDKWIVSGGVRYITYNQVAGRGRPFHANTDLSGSRWLPRAGIVYKWTDSFSLYGSYSQSL
KPSSSIAPMASGYVIDAATPPEQATAWEVGGKLDLPGGITGTLALFDIDKKNVLVSQFNDATKLTDWRTSGKARSRGVEL
DVSGRIGERVNVIASYAYIDAKTIEDPLYAGNRLWNVARHTASLAAVYDVGTLAGGDDLRIGAAARYVGARPGDSANSFT
LPSYVLADAFATYDTRLGKQKLSFQLNVKNLFNRTYYPSSANRYFVAIGDARQVSLLTTLQF

Specific function: Specific receptor for the siderophores ferric pseudobactin BN8 and ferric pseudobactin BN7, iron chelating molecules that allow the organism to extract iron from the environment, especially under iron-restricted conditions [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=755, Percent_Identity=26.7549668874172, Blast_Score=175, Evalue=1e-44,
Organism=Escherichia coli, GI1790743, Length=829, Percent_Identity=23.642943305187, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1787723, Length=304, Percent_Identity=26.6447368421053, Blast_Score=77, Evalue=7e-15,
Organism=Escherichia coli, GI1787024, Length=387, Percent_Identity=27.1317829457364, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 92963; Mature: 92832

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNESRTGPSFTDFSIMVSIRLMPRRRPASARHTRRTIVPAAPNRVAHRLAGAVLLSALL
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHCCEEECCCCCHHHHHHHHHHHHHHHHH
PLPALADADTDAAAAAPRTSRRAFDVPAGPLEATLNRFGRDAGLLIAFPPELTAGLSSGG
CCCCCCCCCCCHHHCCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEECCHHHCCCCCCC
VHGRFDVDDALARVLAGTGLVALRQSGGGYTLMRANGANGANGMSGAAVPAPSADTAAEL
CCCEECHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHC
PTIAVRSSALRAQSYRPPKEAGVLRADIPVLDTAQAVNVVPAQVLRDQRPRNLDDALGNV
CCHHHHHHHHHHHCCCCHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCC
SGITQGNTLAGTQDTIMKRGFGDNRDGSVMHNGMPIVQGRSFNAAVDSVEVLKGPTSLLY
CCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHCCCHHHHH
GLMDPGGVVNVVSKQPQLTRYNAVSLGASTFGHGKNGGSATFDSTGPIGDSRLAYRLIVD
HCCCCCCEEEEECCCCCCEEECEEEECCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
QSNEQYWRNFGEYRQTFVAPSLAWYGRDTQVVVSYEYRKFHSPFDRGTALDPRTNAPLDI
CCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCC
PARRRIDEPFNNMDGESHLAQLSVDHQFNADWSAHFGYSYNRETYDANQLRTTGVDPVTG
CHHHHCCCCCCCCCCCHHEEEEEECCCCCCCCCEECCCCCCCCCCCCCCEEECCCCCCCC
TLSRSNDATHGSLSTDSYGIGYVNGKLTLAGMRHDVQVGFDTEYRRIYRKDMLRQAVKTP
CCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHCC
FSYVDPVYGLLPPSSTVSASDSDQTDALHDASAFLQDTIHLTDKWIVSGGVRYITYNQVA
HHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEEECCC
GRGRPFHANTDLSGSRWLPRAGIVYKWTDSFSLYGSYSQSLKPSSSIAPMASGYVIDAAT
CCCCCEECCCCCCCCCCCCCCCEEEEECCCEEEEECHHHCCCCCCCCCCCCCCEEEECCC
PPEQATAWEVGGKLDLPGGITGTLALFDIDKKNVLVSQFNDATKLTDWRTSGKARSRGVE
CCCCCCEEECCCEEECCCCCEEEEEEEECCCCCEEEECCCCCHHCCCCCCCCCHHHCCEE
LDVSGRIGERVNVIASYAYIDAKTIEDPLYAGNRLWNVARHTASLAAVYDVGTLAGGDDL
EEECCCCCCCEEEEEEEEEEEHHHCCCHHHCCHHHHHHHHHHHHHHHEEECCCCCCCCCE
RIGAAARYVGARPGDSANSFTLPSYVLADAFATYDTRLGKQKLSFQLNVKNLFNRTYYPS
EECHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCC
SANRYFVAIGDARQVSLLTTLQF
CCCEEEEEECCCCEEEEEEEECC
>Mature Secondary Structure 
GNESRTGPSFTDFSIMVSIRLMPRRRPASARHTRRTIVPAAPNRVAHRLAGAVLLSALL
CCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHCCEEECCCCCHHHHHHHHHHHHHHHHH
PLPALADADTDAAAAAPRTSRRAFDVPAGPLEATLNRFGRDAGLLIAFPPELTAGLSSGG
CCCCCCCCCCCHHHCCCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEECCHHHCCCCCCC
VHGRFDVDDALARVLAGTGLVALRQSGGGYTLMRANGANGANGMSGAAVPAPSADTAAEL
CCCEECHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHC
PTIAVRSSALRAQSYRPPKEAGVLRADIPVLDTAQAVNVVPAQVLRDQRPRNLDDALGNV
CCHHHHHHHHHHHCCCCHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCC
SGITQGNTLAGTQDTIMKRGFGDNRDGSVMHNGMPIVQGRSFNAAVDSVEVLKGPTSLLY
CCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCEEECCCCCHHHHHHHHHCCCHHHHH
GLMDPGGVVNVVSKQPQLTRYNAVSLGASTFGHGKNGGSATFDSTGPIGDSRLAYRLIVD
HCCCCCCEEEEECCCCCCEEECEEEECCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
QSNEQYWRNFGEYRQTFVAPSLAWYGRDTQVVVSYEYRKFHSPFDRGTALDPRTNAPLDI
CCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCC
PARRRIDEPFNNMDGESHLAQLSVDHQFNADWSAHFGYSYNRETYDANQLRTTGVDPVTG
CHHHHCCCCCCCCCCCHHEEEEEECCCCCCCCCEECCCCCCCCCCCCCCEEECCCCCCCC
TLSRSNDATHGSLSTDSYGIGYVNGKLTLAGMRHDVQVGFDTEYRRIYRKDMLRQAVKTP
CCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHCC
FSYVDPVYGLLPPSSTVSASDSDQTDALHDASAFLQDTIHLTDKWIVSGGVRYITYNQVA
HHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEEECCC
GRGRPFHANTDLSGSRWLPRAGIVYKWTDSFSLYGSYSQSLKPSSSIAPMASGYVIDAAT
CCCCCEECCCCCCCCCCCCCCCEEEEECCCEEEEECHHHCCCCCCCCCCCCCCEEEECCC
PPEQATAWEVGGKLDLPGGITGTLALFDIDKKNVLVSQFNDATKLTDWRTSGKARSRGVE
CCCCCCEEECCCEEECCCCCEEEEEEEECCCCCEEEECCCCCHHCCCCCCCCCHHHCCEE
LDVSGRIGERVNVIASYAYIDAKTIEDPLYAGNRLWNVARHTASLAAVYDVGTLAGGDDL
EEECCCCCCCEEEEEEEEEEEHHHCCCHHHCCHHHHHHHHHHHHHHHEEECCCCCCCCCE
RIGAAARYVGARPGDSANSFTLPSYVLADAFATYDTRLGKQKLSFQLNVKNLFNRTYYPS
EECHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCC
SANRYFVAIGDARQVSLLTTLQF
CCCEEEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8392140 [H]