Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is yhhW [C]
Identifier: 161525090
GI number: 161525090
Start: 2097574
End: 2098467
Strand: Direct
Name: yhhW [C]
Synonym: Bmul_1918
Alternate gene names: 161525090
Gene position: 2097574-2098467 (Clockwise)
Preceding gene: 161525089
Following gene: 161525102
Centisome position: 60.83
GC content: 70.47
Gene sequence:
>894_bases ATGCCTGCCGCGATCAAGACCCTGCTCACCCCGCGCGAAAGCGACATCGGCAACCTCGTCGTGCGTCGCGTGCTGCCCGC GCGTGCCGCGCGCCTCGTCGGCCCGTTCATCTTCTTCGACGAGATGGGCCCTGCCGTGCTGCCGGCCGGCCGCGGCATCG ACGTGCTGCCGCATCCGCATATCGGTCTCGCGACCGTCACCTATCTGTTCGACGGCACGCTGATGCATCACGACAGTCTC GGCTTCCGGCAGAAGATCGTGCCGGGCGACGTGAACTGGATGACGGCCGGGCGCGGCATCGTGCATTCCGAGCGCTCGCC CGACGAAGACCGCCCGCGCGACCAGCCGGTGCACGGCATTCAGACCTGGGTCGCGCTGCCGGTCGAGCACGAGGACACCG CGCCCGCGTTCGTCCATCACGCGGCCGATACGCTGCCCGTGCTCGAGCGCGACGGCGCGCGCGTCTGCGTGATCGCGGGC ACGGCGTTCGGGCTGACGTCGCCGGTCGCGGTGTTTTCGCCGACGCTCTATGCATACGCGCAATTCGCGGCCGGCGGCCG GCTCGCGCTCGATGCGGAGCACGACGAGCGCGGCGTCTATCTCGTCGACGGCGACCTGCGCATCGACGATACGCCGCTCG CAGCGTCCACGATGGCCGTGCTCGAACCGGGCGCGACCGTCACGCTCGCGAGCACGCACGGCGCGCGCGTCATGCTGCTC GGCGGCGCACATCTGCCGGGCGAGCGCTTCGTCGAATGGAACTTCGTGTCGAGTTCGCGCGAGAAAATCGACGCGGCGCG CGACGCGTGGGCCGCGCAGACCTTCGGCAAGGTGCCCGGCGAAGAAGACGAATGGACGCGCCAGCCGGCCCGCAAGCCGC AGTCGTCCGCCTGA
Upstream 100 bases:
>100_bases CTGCAGATCGCGAACGCGTGCCCCGTGCACAAGATCCTCACGCACCCGATCGCGATCGATACCGCGATCGCGTGACACCG CAACGAACCGGAACGCCGCG
Downstream 100 bases:
>100_bases GCATGCAGACGCGCGCGGCCCGGCATGGCGCCGCTCAGCGCGCGAGCCCCATCAGCTTCGCGAGCACGGGCCAGCGCGCG AGCGCGTCGACGTACGCGCG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPAAIKTLLTPRESDIGNLVVRRVLPARAARLVGPFIFFDEMGPAVLPAGRGIDVLPHPHIGLATVTYLFDGTLMHHDSL GFRQKIVPGDVNWMTAGRGIVHSERSPDEDRPRDQPVHGIQTWVALPVEHEDTAPAFVHHAADTLPVLERDGARVCVIAG TAFGLTSPVAVFSPTLYAYAQFAAGGRLALDAEHDERGVYLVDGDLRIDDTPLAASTMAVLEPGATVTLASTHGARVMLL GGAHLPGERFVEWNFVSSSREKIDAARDAWAAQTFGKVPGEEDEWTRQPARKPQSSA
Sequences:
>Translated_297_residues MPAAIKTLLTPRESDIGNLVVRRVLPARAARLVGPFIFFDEMGPAVLPAGRGIDVLPHPHIGLATVTYLFDGTLMHHDSL GFRQKIVPGDVNWMTAGRGIVHSERSPDEDRPRDQPVHGIQTWVALPVEHEDTAPAFVHHAADTLPVLERDGARVCVIAG TAFGLTSPVAVFSPTLYAYAQFAAGGRLALDAEHDERGVYLVDGDLRIDDTPLAASTMAVLEPGATVTLASTHGARVMLL GGAHLPGERFVEWNFVSSSREKIDAARDAWAAQTFGKVPGEEDEWTRQPARKPQSSA >Mature_296_residues PAAIKTLLTPRESDIGNLVVRRVLPARAARLVGPFIFFDEMGPAVLPAGRGIDVLPHPHIGLATVTYLFDGTLMHHDSLG FRQKIVPGDVNWMTAGRGIVHSERSPDEDRPRDQPVHGIQTWVALPVEHEDTAPAFVHHAADTLPVLERDGARVCVIAGT AFGLTSPVAVFSPTLYAYAQFAAGGRLALDAEHDERGVYLVDGDLRIDDTPLAASTMAVLEPGATVTLASTHGARVMLLG GAHLPGERFVEWNFVSSSREKIDAARDAWAAQTFGKVPGEEDEWTRQPARKPQSSA
Specific function: Unknown
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=274, Percent_Identity=31.3868613138686, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI4505823, Length=274, Percent_Identity=31.3868613138686, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: NA
Molecular weight: Translated: 32038; Mature: 31906
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAIKTLLTPRESDIGNLVVRRVLPARAARLVGPFIFFDEMGPAVLPAGRGIDVLPHPH CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCC IGLATVTYLFDGTLMHHDSLGFRQKIVPGDVNWMTAGRGIVHSERSPDEDRPRDQPVHGI CHHHHHHHHHCCEEEECCCCCCHHCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCHHE QTWVALPVEHEDTAPAFVHHAADTLPVLERDGARVCVIAGTAFGLTSPVAVFSPTLYAYA EEEEEEECCCCCCCCHHHHHHHCCCCCEECCCCEEEEEECCHHCCCCCHHHHCCHHHHHH QFAAGGRLALDAEHDERGVYLVDGDLRIDDTPLAASTMAVLEPGATVTLASTHGARVMLL HHCCCCEEEEECCCCCCCEEEEECCEEECCCCCCHHHHEEECCCCEEEEEECCCCEEEEE GGAHLPGERFVEWNFVSSSREKIDAARDAWAAQTFGKVPGEEDEWTRQPARKPQSSA ECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure PAAIKTLLTPRESDIGNLVVRRVLPARAARLVGPFIFFDEMGPAVLPAGRGIDVLPHPH CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCC IGLATVTYLFDGTLMHHDSLGFRQKIVPGDVNWMTAGRGIVHSERSPDEDRPRDQPVHGI CHHHHHHHHHCCEEEECCCCCCHHCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCHHE QTWVALPVEHEDTAPAFVHHAADTLPVLERDGARVCVIAGTAFGLTSPVAVFSPTLYAYA EEEEEEECCCCCCCCHHHHHHHCCCCCEECCCCEEEEEECCHHCCCCCHHHHCCHHHHHH QFAAGGRLALDAEHDERGVYLVDGDLRIDDTPLAASTMAVLEPGATVTLASTHGARVMLL HHCCCCEEEEECCCCCCCEEEEECCEEECCCCCCHHHHEEECCCCEEEEEECCCCEEEEE GGAHLPGERFVEWNFVSSSREKIDAARDAWAAQTFGKVPGEEDEWTRQPARKPQSSA ECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]