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The map label for this gene is glcD [H]

Identifier: 161525034

GI number: 161525034

Start: 2031278

End: 2032696

Strand: Direct

Name: glcD [H]

Synonym: Bmul_1862

Alternate gene names: 161525034

Gene position: 2031278-2032696 (Clockwise)

Preceding gene: 161525033

Following gene: 161525035

Centisome position: 58.9

GC content: 68.36

Gene sequence:

>1419_bases
ATGTCCATCGACACTTTCGTTTCCGCATGCCGCGACGCGATCGGCGCCGCGCACGTACTGACCGACGCGCACGACACCGA
ACCGTTCCTGACCGACTGGCGCCGCCGCTACAAGGGTGCCGCCTGCGCCGTGCTGCGGCCGGGCAGCACGGCCGAAGTCG
CGGCGCTCGTGCGCATCGCGAACCAGCACGGCGTCGCGCTCGTGCCGCAAGGCGGCAACACGGGCCTCGCCGGCGGCGCG
ACGCCGGACACTTCCGGCACGCAGGCCGTGCTGAGCCTGGCGCGGCTCAATCGCGTGCGCGCGCTCGATCCGCACAACAA
CACGATCACCGTCGAAGCGGGCGTGATCCTGGCCGACGTGCAGGCACGTGCGCGCGAAGGCGGCCGCCTGTTCGCGCTCA
GCCTCGCGGCGGAAGGCAGCTGCACGATCGGCGGCAATCTGTCGACGAACGCGGGCGGCACCGCGGTGCTGCGCTACGGC
AACGCGCGCGAGCTCTGTCTCGGCCTCGAGGTCGTGACGCCGCAAGGCGAGATCTGGGACGGCCTGCGCGGACTGCGCAA
GGACAACACCGGCTACGACCTGCGCGATCTGTTCATCGGCGCGGAAGGCACGCTCGGCATCATCACGGCCGCCGTGATGA
AGCTGCATCCGCTGCCGGCCGCGCAGGTCACGGCGCTGGCCGCGCTCGAATCGCCGCACGCGGCGCTCGACTTCCTGTCG
CTCGCGCAGCGCGCGGCCGGCCCGCTGCTGACGGGCTTCGAGCTGATGTCCGATTTCTGCATGCAGCTCGTCGGCAAGCA
CTATCCGCAATTGCGCTATCCATTCGCACAGACGCACGCGCAGACGGTGCTGCTCGAACTGTCCGACAACGAAAGTGAAA
CGCATGCGCGCGCGCTGTTCGAAAAGCTGATGGAAGAAGCGTTCGACGCGGGGCTCGTCGTCGATGCGGTGGTCGCGGAA
AACCTCGCGCAGTCGCGCGCGTTCTGGGACTTGCGCGAGCACATCCCGCTCGCGCAGGCCGACGAAGGGCTCAACATCAA
GCACGACATCGCGGTGCCGATCTCGTCGATCGCGCGCTTCATCGACGAAACGGACGCGGCGATCCAGCAGGCCGCGCCCG
GCGCGCGGATGGTCACGTTCGGCCATCTCGGCGACGGCAATCTGCACTACAACGTGCAGACACCCGAAGGCGGCGATCCG
AAGGCGTTCCTCGCGCAGTTCCAGGCGCCGATCAACCGCATCGTGTACGACAACGTGCATCGCCATCACGGCACGATCAG
CGCGGAGCACGGCATCGGGCAACTGAAGATCGACGACGCGCAGCGCTACAAGTCGCCGGTCGAAACGGCGCTGATGCGCA
CGCTGAAGACCGCGCTCGATCCGCGCGGGCTCATGAATCCGGGCAAGGTCCTGCGCTGA

Upstream 100 bases:

>100_bases
CCTCGGCTTCTTCGCGGCTGCACTCGCCTACGTCGCGCCGTTCAAACGGGCGGCGAAAAAGCAGCGCGCCGCGTCCTGAC
CCTTACGCGACAGGATGATG

Downstream 100 bases:

>100_bases
AGCCGTCCATTCGGGAGCGACGTTCGTGAAAATCCGTGTGCTGTCCGACCTGCACCTCGAAAGCCACCAGCCCGACACGA
TCGCACATGCGGACGCCGAT

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MSIDTFVSACRDAIGAAHVLTDAHDTEPFLTDWRRRYKGAACAVLRPGSTAEVAALVRIANQHGVALVPQGGNTGLAGGA
TPDTSGTQAVLSLARLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYG
NARELCLGLEVVTPQGEIWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFLS
LAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESETHARALFEKLMEEAFDAGLVVDAVVAE
NLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGDP
KAFLAQFQAPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETALMRTLKTALDPRGLMNPGKVLR

Sequences:

>Translated_472_residues
MSIDTFVSACRDAIGAAHVLTDAHDTEPFLTDWRRRYKGAACAVLRPGSTAEVAALVRIANQHGVALVPQGGNTGLAGGA
TPDTSGTQAVLSLARLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYG
NARELCLGLEVVTPQGEIWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFLS
LAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESETHARALFEKLMEEAFDAGLVVDAVVAE
NLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGDP
KAFLAQFQAPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETALMRTLKTALDPRGLMNPGKVLR
>Mature_471_residues
SIDTFVSACRDAIGAAHVLTDAHDTEPFLTDWRRRYKGAACAVLRPGSTAEVAALVRIANQHGVALVPQGGNTGLAGGAT
PDTSGTQAVLSLARLNRVRALDPHNNTITVEAGVILADVQARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGN
ARELCLGLEVVTPQGEIWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFLSL
AQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESETHARALFEKLMEEAFDAGLVVDAVVAEN
LAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGDPK
AFLAQFQAPINRIVYDNVHRHHGTISAEHGIGQLKIDDAQRYKSPVETALMRTLKTALDPRGLMNPGKVLR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=453, Percent_Identity=37.7483443708609, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI37595756, Length=479, Percent_Identity=32.1503131524008, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI37595754, Length=502, Percent_Identity=30.8764940239044, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI4501993, Length=456, Percent_Identity=22.8070175438596, Blast_Score=101, Evalue=2e-21,
Organism=Escherichia coli, GI1789351, Length=476, Percent_Identity=28.5714285714286, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1787977, Length=497, Percent_Identity=25.3521126760563, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI48994907, Length=218, Percent_Identity=25.6880733944954, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17534361, Length=447, Percent_Identity=34.4519015659955, Blast_Score=266, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI71992373, Length=475, Percent_Identity=27.7894736842105, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71992381, Length=471, Percent_Identity=26.963906581741, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71992392, Length=357, Percent_Identity=29.9719887955182, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=199, Percent_Identity=27.1356783919598, Blast_Score=85, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6320023, Length=458, Percent_Identity=35.8078602620087, Blast_Score=307, Evalue=2e-84,
Organism=Saccharomyces cerevisiae, GI6320764, Length=450, Percent_Identity=32.8888888888889, Blast_Score=260, Evalue=3e-70,
Organism=Saccharomyces cerevisiae, GI6320027, Length=441, Percent_Identity=27.891156462585, Blast_Score=147, Evalue=5e-36,
Organism=Drosophila melanogaster, GI18921117, Length=469, Percent_Identity=36.8869936034115, Blast_Score=284, Evalue=7e-77,
Organism=Drosophila melanogaster, GI24639277, Length=469, Percent_Identity=36.8869936034115, Blast_Score=284, Evalue=7e-77,
Organism=Drosophila melanogaster, GI24639275, Length=469, Percent_Identity=36.8869936034115, Blast_Score=284, Evalue=7e-77,
Organism=Drosophila melanogaster, GI24653753, Length=219, Percent_Identity=30.1369863013699, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50449; Mature: 50318

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDTFVSACRDAIGAAHVLTDAHDTEPFLTDWRRRYKGAACAVLRPGSTAEVAALVRIA
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
NQHGVALVPQGGNTGLAGGATPDTSGTQAVLSLARLNRVRALDPHNNTITVEAGVILADV
CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEEC
QARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGNARELCLGLEVVTPQGEIWD
HHHHCCCCEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHH
GLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFLS
HHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
LAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESETHARALF
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEEECCCCCHHHHHHHH
EKLMEEAFDAGLVVDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHH
IDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGDPKAFLAQFQAPINRIVYDNVH
HHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RHHGTISAEHGIGQLKIDDAQRYKSPVETALMRTLKTALDPRGLMNPGKVLR
HHCCCEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIDTFVSACRDAIGAAHVLTDAHDTEPFLTDWRRRYKGAACAVLRPGSTAEVAALVRIA
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
NQHGVALVPQGGNTGLAGGATPDTSGTQAVLSLARLNRVRALDPHNNTITVEAGVILADV
CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEEC
QARAREGGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGNARELCLGLEVVTPQGEIWD
HHHHCCCCEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHH
GLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPLPAAQVTALAALESPHAALDFLS
HHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
LAQRAAGPLLTGFELMSDFCMQLVGKHYPQLRYPFAQTHAQTVLLELSDNESETHARALF
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEEEECCCCCHHHHHHHH
EKLMEEAFDAGLVVDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHH
IDETDAAIQQAAPGARMVTFGHLGDGNLHYNVQTPEGGDPKAFLAQFQAPINRIVYDNVH
HHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RHHGTISAEHGIGQLKIDDAQRYKSPVETALMRTLKTALDPRGLMNPGKVLR
HHCCCEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]