Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is recT [H]
Identifier: 161525024
GI number: 161525024
Start: 2024203
End: 2025252
Strand: Direct
Name: recT [H]
Synonym: Bmul_1851
Alternate gene names: 161525024
Gene position: 2024203-2025252 (Clockwise)
Preceding gene: 161525023
Following gene: 161525025
Centisome position: 58.7
GC content: 63.05
Gene sequence:
>1050_bases ATGGGTCAAACCACCAACATCGCCAAGCTCAAGCAGACCTCCAAGATGGTCGCGCGCGATGCCGGTATCGGCAGCGTCAA GACCTTCTTCGAGTCGCAAAAGGCAACGCTCGCCGCGGTGCTGCCGCGCCACGTCAGCCCGGATCGCATGCTGAAGATCG CGCTCGGCGCGCTGCGCACGACGCCGAAGCTGATGGAGTGCACGGTCGAATCACTGATGGGCGCTGTCGTGCAGTGCTCG CAGCTCGGCCTCGAACCGAATACGCCGCTCGGCCACGCCTACCTGATCCCGTTCGAAAAGAAAAAGAAGGTAGGCGGTGA ATGGGTGACGGAAAAGGTCGAGACGCAGATCGTCATCGGCTACAAGGGCCTCATCGATCTCGCGCGCCGTTCCGGCCAGG TCGTCAGTATCGCCGCGCATGCAGTGTACGAGCACGACCACTTCGACTACGCGTTCGGCCTCAACGAAAAGCTGGAGCAC AAGCCGGCCATGTCTGCGCGCGGCCGCGTGATCGCTTTCTATGCCGTCGCGAAGCTGGTCGGCGGCGGCCATGCGTTCGA GGTGATGAGTGCCGAGCAGGTCAACGAGATTCGCGATGCCAGCCAAAACTACAAGTTCGCGCGCGACAAGTCGAAGACCG TGTGGGGCCAGCACTACGAGGAAATGGGCCGCAAGACCGTGCTGCGCCGCCTGTTCAAGTACCTGCCGGTGAGCATCGAG CTCGCGAGCGCGGCTGCACTCGATGATGTCGGCGCATCCGGCCGCTCGCAAGCTCTCGACACGGTACTTGATGGCGACTA CATCACACCGACCGACGATGAAGAGGACGACGGCGAGATCGATCCGCCGGCTGGCCTCACCGACCAGCGCCAGCAACAGG CCGACATGACGCTGCCGAGCTACGACGACCTGCTCGCGCAAATCCAGAAAGCGAACGACGTCGAGGTGCTCGCACTCGTT CTCGACAGCGCGCGCGATCTGCCGAAGGCCGAGTACGTGAAGCTCGAGCAGGCGTATCAGGACCGCCGTGAAGTGCTGCT CGGCGCGTAA
Upstream 100 bases:
>100_bases ACGCCGAGTGCATGCGCACCAACACGTGGCCTGGGTATTCGACGGGCATTGACATCATCCGCCTGCCGCAATGGGCGCTC ATCACCGAGGAATAAAAACC
Downstream 100 bases:
>100_bases CCCACGCCCGCGCGGCATCCGTCGCGCGGCACCCACCCCTGATGCTGATGCAACGAATTGAGGATGCGATGACTTTCCGA TTTGGCTCTGTCTGTAGCGG
Product: RecT protein
Products: NA
Alternate protein names: P33 [H]
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MGQTTNIAKLKQTSKMVARDAGIGSVKTFFESQKATLAAVLPRHVSPDRMLKIALGALRTTPKLMECTVESLMGAVVQCS QLGLEPNTPLGHAYLIPFEKKKKVGGEWVTEKVETQIVIGYKGLIDLARRSGQVVSIAAHAVYEHDHFDYAFGLNEKLEH KPAMSARGRVIAFYAVAKLVGGGHAFEVMSAEQVNEIRDASQNYKFARDKSKTVWGQHYEEMGRKTVLRRLFKYLPVSIE LASAAALDDVGASGRSQALDTVLDGDYITPTDDEEDDGEIDPPAGLTDQRQQQADMTLPSYDDLLAQIQKANDVEVLALV LDSARDLPKAEYVKLEQAYQDRREVLLGA
Sequences:
>Translated_349_residues MGQTTNIAKLKQTSKMVARDAGIGSVKTFFESQKATLAAVLPRHVSPDRMLKIALGALRTTPKLMECTVESLMGAVVQCS QLGLEPNTPLGHAYLIPFEKKKKVGGEWVTEKVETQIVIGYKGLIDLARRSGQVVSIAAHAVYEHDHFDYAFGLNEKLEH KPAMSARGRVIAFYAVAKLVGGGHAFEVMSAEQVNEIRDASQNYKFARDKSKTVWGQHYEEMGRKTVLRRLFKYLPVSIE LASAAALDDVGASGRSQALDTVLDGDYITPTDDEEDDGEIDPPAGLTDQRQQQADMTLPSYDDLLAQIQKANDVEVLALV LDSARDLPKAEYVKLEQAYQDRREVLLGA >Mature_348_residues GQTTNIAKLKQTSKMVARDAGIGSVKTFFESQKATLAAVLPRHVSPDRMLKIALGALRTTPKLMECTVESLMGAVVQCSQ LGLEPNTPLGHAYLIPFEKKKKVGGEWVTEKVETQIVIGYKGLIDLARRSGQVVSIAAHAVYEHDHFDYAFGLNEKLEHK PAMSARGRVIAFYAVAKLVGGGHAFEVMSAEQVNEIRDASQNYKFARDKSKTVWGQHYEEMGRKTVLRRLFKYLPVSIEL ASAAALDDVGASGRSQALDTVLDGDYITPTDDEEDDGEIDPPAGLTDQRQQQADMTLPSYDDLLAQIQKANDVEVLALVL DSARDLPKAEYVKLEQAYQDRREVLLGA
Specific function: Binds to single-stranded DNA and also promotes the renaturation of complementary single-stranded DNA. Function in recombination. Has a function similar to that of lambda redB [H]
COG id: COG3723
COG function: function code L; Recombinational DNA repair protein (RecE pathway)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787611, Length=244, Percent_Identity=45.4918032786885, Blast_Score=216, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004590 - InterPro: IPR018330 [H]
Pfam domain/function: PF03837 RecT [H]
EC number: NA
Molecular weight: Translated: 38408; Mature: 38277
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQTTNIAKLKQTSKMVARDAGIGSVKTFFESQKATLAAVLPRHVSPDRMLKIALGALRT CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC TPKLMECTVESLMGAVVQCSQLGLEPNTPLGHAYLIPFEKKKKVGGEWVTEKVETQIVIG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHCEEEEEE YKGLIDLARRSGQVVSIAAHAVYEHDHFDYAFGLNEKLEHKPAMSARGRVIAFYAVAKLV HHHHHHHHHCCCCEEEEEHHHHHHCCCCCEEECCCHHHHCCCCCCCCCCEEHHHHHHHHH GGGHAFEVMSAEQVNEIRDASQNYKFARDKSKTVWGQHYEEMGRKTVLRRLFKYLPVSIE CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE LASAAALDDVGASGRSQALDTVLDGDYITPTDDEEDDGEIDPPAGLTDQRQQQADMTLPS EHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC YDDLLAQIQKANDVEVLALVLDSARDLPKAEYVKLEQAYQDRREVLLGA HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GQTTNIAKLKQTSKMVARDAGIGSVKTFFESQKATLAAVLPRHVSPDRMLKIALGALRT CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC TPKLMECTVESLMGAVVQCSQLGLEPNTPLGHAYLIPFEKKKKVGGEWVTEKVETQIVIG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHCEEEEEE YKGLIDLARRSGQVVSIAAHAVYEHDHFDYAFGLNEKLEHKPAMSARGRVIAFYAVAKLV HHHHHHHHHCCCCEEEEEHHHHHHCCCCCEEECCCHHHHCCCCCCCCCCEEHHHHHHHHH GGGHAFEVMSAEQVNEIRDASQNYKFARDKSKTVWGQHYEEMGRKTVLRRLFKYLPVSIE CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE LASAAALDDVGASGRSQALDTVLDGDYITPTDDEEDDGEIDPPAGLTDQRQQQADMTLPS EHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC YDDLLAQIQKANDVEVLALVLDSARDLPKAEYVKLEQAYQDRREVLLGA HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8244937; 9097039; 9278503; 8416902 [H]