Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is 161524910
Identifier: 161524910
GI number: 161524910
Start: 1918030
End: 1919715
Strand: Direct
Name: 161524910
Synonym: Bmul_1737
Alternate gene names: NA
Gene position: 1918030-1919715 (Clockwise)
Preceding gene: 161524895
Following gene: 161524911
Centisome position: 55.62
GC content: 73.43
Gene sequence:
>1686_bases ATGGACATTCAGGTTATCCCTCATGGCACGTTCCGGGCGACTCTGATCGCGGCCACCGTAGCAGCCATGCTCTCCCTCTC CGCATGCGGCGGTTCCGGTTCCATCAGCAAGGGGCTCGGCGGCGGCTCGAGCTCCGGCGGCGGCGATATCGTGACGTCCG GCGGCACGTCGGGCTCGTCCGGTTCGTCGGGTTCGTCCGGCACCTCGGGCACGAGCGGCACCAGCGGCTCGAGCAGCGGT AGCACGAGCGGCTCGACGAGCGGCAGCACCAGCGGTTCGACGAGCGGCACGACGAGTGGAACGTCCAGCGGAACGAGCGG CACGTCCGGCGTGTCCGCGAACCCAGTGGGGAAGGTCCTCGCACAAAGCAGCAACATCGTCACGGGCCTCGGCGATACCG TGTCCGGCGCCGGCTCGATGCTCGCAGGGCAATCACTGCCCGGCCTGAATCCCGCCACCACGCAAGCCGCGGGCGGCATC GTGCAGAACGTCGGCGGCGCAGTCAGCGCGCTCGGCACCGGCCTCGGCAACGGTCTCGGCCAGCTCGGTGCGACCGCCAA TCCGGTCGGCACCACGGTCGCGAGCACGGGCGGCGTCGTCAATCAGCTCGGCGGCGCAGTCACGCAGACGGGCAATCTCG TCACGAGCCTCGGCAGCGGTCCGCTGTCGCCGCTCGCACCGGTCACGGGCGCGGTCGGCGGCCTCGTGTCGACGGTCGGC AACGCGGTGTCGAGCGGCGGCACGACGCTTGGCAATGTGCTGTCGACGGGTCCGATCCAGCAAGTCACGCAGTCGGTCAG CTCGGCCATCACGCCGATCACGACGATGGTCGGTCAGACGACGCAGACGATCGGCACGGCCACCGGTCTCGGCGCACCGG TCAACACGCTGCTCGGCACCGTCGGCAACGGCCTGAACCAGGCCGGCGCACTGCTCGCGGCAACGGGCGGCAACCCCGTC ACGACCGGCCTCGGCAATACCGTATCGTCGACCGGCAACACCGTGAAGGCCGTCGGCGGCCTGCTTACCGGCAGCACCGG CGGCGTCACGAACCCGCTCGCGCCGCTCACGGGTCTCGTCTCGACCGTCACGGGCACGCTCGGCGGTGCCGCGGGCGGCG GCAGCGGTCCGCTCGCGCCCGTCACCGGCCTCGTCTCGACCGTCACCGGTACGCTCGGCGGCGCAGCAGGCGGCGGCAGC GGCCCGCTCGCGCCCGTCACCGGCCTCGTCTCGACCGTCACCGGCGCACTCGGTGGCGCCGCAGGCGGCGGCAGCGGCCC GCTCGCGCCCGTCACCGGCCTCGTCTCGACTGTCACCGGCGCACTCGGTGGGGCTGCAGGCGGCGGCAGCGGTCCGCTCG CCCCCGTGACCGGCCTCGTCTCGACCGTCACCGGCGCACTCGGCGGCGCCGCAGGCGGCACGAGCGGCGGTCCGCTCGCC CCCGTCACGGGCCTCGTGTCGACCGTCACCGGCGCGCTCGGCGGCGCCGCAGGGGGCGGCAGCGCGCTTGCCCCCGTGAC GGGCGCGGTCTCGACGGTCACCAGCACGGTCGGCAGCGCAACGGCCGGTGCGCCGGCGCTGAGCGGCGGCACGGGCGCCG TCACGAACTCGGGCTCGTCGTCGAATCTGCTGTCGCCGGTGACCTCGCTGATCGGCGGCCTGCTCGGCGGCACGCACGGC AAGTAA
Upstream 100 bases:
>100_bases TTAAAACGATTTCGGCGCGCTTGGCCGCGAAATTGGCACGACAGTTGCAGAGTAGTCCGCGCATCACTCAACACAACACA GCTTTTAATGCGAGGACGAA
Downstream 100 bases:
>100_bases TCCGAATCCATTCATCGACAAGACAGCGAGGAGCCCATCATGTCCCAGCAACGTTCCCTGACGACGGCCGCCCTGCAACA GTGGCGCGTCCCCCTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Hemagglutinin-Related Transmembrane Protein; Triple Helix Repeat-Containing Collagen; Collagen Triple Helix Repeat; Hemagglutinin Transmembrane Protein
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MDIQVIPHGTFRATLIAATVAAMLSLSACGGSGSISKGLGGGSSSGGGDIVTSGGTSGSSGSSGSSGTSGTSGTSGSSSG STSGSTSGSTSGSTSGTTSGTSSGTSGTSGVSANPVGKVLAQSSNIVTGLGDTVSGAGSMLAGQSLPGLNPATTQAAGGI VQNVGGAVSALGTGLGNGLGQLGATANPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVSTVG NAVSSGGTTLGNVLSTGPIQQVTQSVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLAATGGNPV TTGLGNTVSSTGNTVKAVGGLLTGSTGGVTNPLAPLTGLVSTVTGTLGGAAGGGSGPLAPVTGLVSTVTGTLGGAAGGGS GPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAAGGTSGGPLA PVTGLVSTVTGALGGAAGGGSALAPVTGAVSTVTSTVGSATAGAPALSGGTGAVTNSGSSSNLLSPVTSLIGGLLGGTHG K
Sequences:
>Translated_561_residues MDIQVIPHGTFRATLIAATVAAMLSLSACGGSGSISKGLGGGSSSGGGDIVTSGGTSGSSGSSGSSGTSGTSGTSGSSSG STSGSTSGSTSGSTSGTTSGTSSGTSGTSGVSANPVGKVLAQSSNIVTGLGDTVSGAGSMLAGQSLPGLNPATTQAAGGI VQNVGGAVSALGTGLGNGLGQLGATANPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVSTVG NAVSSGGTTLGNVLSTGPIQQVTQSVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLAATGGNPV TTGLGNTVSSTGNTVKAVGGLLTGSTGGVTNPLAPLTGLVSTVTGTLGGAAGGGSGPLAPVTGLVSTVTGTLGGAAGGGS GPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAAGGTSGGPLA PVTGLVSTVTGALGGAAGGGSALAPVTGAVSTVTSTVGSATAGAPALSGGTGAVTNSGSSSNLLSPVTSLIGGLLGGTHG K >Mature_561_residues MDIQVIPHGTFRATLIAATVAAMLSLSACGGSGSISKGLGGGSSSGGGDIVTSGGTSGSSGSSGSSGTSGTSGTSGSSSG STSGSTSGSTSGSTSGTTSGTSSGTSGTSGVSANPVGKVLAQSSNIVTGLGDTVSGAGSMLAGQSLPGLNPATTQAAGGI VQNVGGAVSALGTGLGNGLGQLGATANPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVSTVG NAVSSGGTTLGNVLSTGPIQQVTQSVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGTVGNGLNQAGALLAATGGNPV TTGLGNTVSSTGNTVKAVGGLLTGSTGGVTNPLAPLTGLVSTVTGTLGGAAGGGSGPLAPVTGLVSTVTGTLGGAAGGGS GPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAAGGTSGGPLA PVTGLVSTVTGALGGAAGGGSALAPVTGAVSTVTSTVGSATAGAPALSGGTGAVTNSGSSSNLLSPVTSLIGGLLGGTHG K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49392; Mature: 49392
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQVIPHGTFRATLIAATVAAMLSLSACGGSGSISKGLGGGSSSGGGDIVTSGGTSGSS CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC GSSGSSGTSGTSGTSGSSSGSTSGSTSGSTSGSTSGTTSGTSSGTSGTSGVSANPVGKVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH AQSSNIVTGLGDTVSGAGSMLAGQSLPGLNPATTQAAGGIVQNVGGAVSALGTGLGNGLG HCCCCEEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLGATANPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVSTVG HCCCCCCCCCCHHHHCCCHHHHHCCHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH NAVSSGGTTLGNVLSTGPIQQVTQSVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGT HHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH VGNGLNQAGALLAATGGNPVTTGLGNTVSSTGNTVKAVGGLLTGSTGGVTNPLAPLTGLV HCCCHHHCCCEEEECCCCCEECCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH STVTGTLGGAAGGGSGPLAPVTGLVSTVTGTLGGAAGGGSGPLAPVTGLVSTVTGALGGA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC AGGGSGPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAAGGTSGGPLA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH PVTGLVSTVTGALGGAAGGGSALAPVTGAVSTVTSTVGSATAGAPALSGGTGAVTNSGSS HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCC SNLLSPVTSLIGGLLGGTHGK CHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDIQVIPHGTFRATLIAATVAAMLSLSACGGSGSISKGLGGGSSSGGGDIVTSGGTSGSS CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC GSSGSSGTSGTSGTSGSSSGSTSGSTSGSTSGSTSGTTSGTSSGTSGTSGVSANPVGKVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH AQSSNIVTGLGDTVSGAGSMLAGQSLPGLNPATTQAAGGIVQNVGGAVSALGTGLGNGLG HCCCCEEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLGATANPVGTTVASTGGVVNQLGGAVTQTGNLVTSLGSGPLSPLAPVTGAVGGLVSTVG HCCCCCCCCCCHHHHCCCHHHHHCCHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH NAVSSGGTTLGNVLSTGPIQQVTQSVSSAITPITTMVGQTTQTIGTATGLGAPVNTLLGT HHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH VGNGLNQAGALLAATGGNPVTTGLGNTVSSTGNTVKAVGGLLTGSTGGVTNPLAPLTGLV HCCCHHHCCCEEEECCCCCEECCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH STVTGTLGGAAGGGSGPLAPVTGLVSTVTGTLGGAAGGGSGPLAPVTGLVSTVTGALGGA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC AGGGSGPLAPVTGLVSTVTGALGGAAGGGSGPLAPVTGLVSTVTGALGGAAGGTSGGPLA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH PVTGLVSTVTGALGGAAGGGSALAPVTGAVSTVTSTVGSATAGAPALSGGTGAVTNSGSS HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCC SNLLSPVTSLIGGLLGGTHGK CHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA