Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is nanT [H]
Identifier: 161524891
GI number: 161524891
Start: 1898131
End: 1899351
Strand: Direct
Name: nanT [H]
Synonym: Bmul_1718
Alternate gene names: 161524891
Gene position: 1898131-1899351 (Clockwise)
Preceding gene: 161524887
Following gene: 161524892
Centisome position: 55.04
GC content: 66.01
Gene sequence:
>1221_bases ATGAGCTGGACCCGCGAACAACGCAACGTGACGATTGCCGCCTATCTCGGCTGGACGCTCGATGCGTTCGATTTTTTCCT GATGGTTTTCGTGCTGAAGGACATCGCGGCGGAATTCGCGTCGACGATCCCGGCCGTCGCGTTCGCGCTGACGCTGACGC TCGCGATGCGTCCGCTCGGCGCACTCATCTTCGGCCGCCTCGCCGATCGCTTCGGCCGCCGCCCGACGCCGATGGTCAAC ATCGCGTGCTATTCCGTGCTCGAGCTCGCGTCGGGCTTCGCGCCGAGCCTCACCGCGCTGCTCGTGCTGCGTGCGCTGTT CGGCATTGCGATGGGCGGCGAATGGGGCGTCGGCTCCGCGCTGACGATGGAGACCGTGCCCACGCACGCGCGCGGCATCG TGTCGGGCCTGCTGCAGGCCGGCTATCCGAGCGGCTATCTGCTCGCGTCGATCGTGTTCGGCCTCTTCTACCAGTACATC GGCTGGCGCGGCATGTTCATGATCGGCGTGCTGCCCGCGCTGCTCGTCTTGTATGTGCGCGCGCATGTGCCGGAGTCGCC CGCGTGGAAGCAGATGGAAAAGCGTGAGCGTCCGAGTCTCGCGACCACGCTGCAGCGAAACTGGAAGCTGACGATCTACG CGATCGTGCTGATGACCGCGTTCAACTTCTTCTCGCACGGCACGCAGGATCTGTATCCGACCTTCCTGCGCGAGCAGCAC CACTTCGATCCGCATACGGTGTCGTGGATCACGATCGTGCTGAACATCGGCGCGATCGTCGGCGGCCTCGCGTTCGGCGC GATCTCGGAGCGGATCGGCCGGCGCCGTGCGATCTTCATCGCCGCGCTGATCGCGCTGCCGGTGCTGCCGCTGTGGGCGT TCTCGAGCGGCCCGCTCGCGCTCGCGGCCGGCGCCTTCCTGATGCAGATTTCGGTGCAAGGGGCGTGGGGTGTGATTCCG GTCCACCTCAACGAAATTTCGCCGGACGAGATTCGCGCGACGTTCCCGGGCGTCGTCTATCAGCTCGGCAACCTGCTCGC GTCCGGCAACGCGACGATGCAGGCGTCGCTCGCCGTCTCGCACGACAACAACTATGCGTTCGCGCTCGCCCTCGTGGCCG GCACCGTCGCGGTCGTGATCGCGGTGCTGATCCTGTTCAGCCGCGAACGGCGCGGCATCGACATGACGCAATCCGTCAAT ACGCGTACCGCCGCGACCTAA
Upstream 100 bases:
>100_bases CGCGCGTCGGCCTACACTCGATCAGTGCCCCGAACCGCGCGCGAATCGGGCCGCACGTCCTTGCGTCCCGCGCGCGCACG CCAACGAGGAGACCTCGCAC
Downstream 100 bases:
>100_bases GCAGACGATTTTGCGCATTGCATCACCGCGCGCGGCCCGCAGCGCCTGGGCCGCGCGCCGCGCTTTCCGCATTCGCACAT CGAACTAGAGGAATCCGACC
Product: major facilitator transporter
Products: NA
Alternate protein names: Sialic acid permease [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSWTREQRNVTIAAYLGWTLDAFDFFLMVFVLKDIAAEFASTIPAVAFALTLTLAMRPLGALIFGRLADRFGRRPTPMVN IACYSVLELASGFAPSLTALLVLRALFGIAMGGEWGVGSALTMETVPTHARGIVSGLLQAGYPSGYLLASIVFGLFYQYI GWRGMFMIGVLPALLVLYVRAHVPESPAWKQMEKRERPSLATTLQRNWKLTIYAIVLMTAFNFFSHGTQDLYPTFLREQH HFDPHTVSWITIVLNIGAIVGGLAFGAISERIGRRRAIFIAALIALPVLPLWAFSSGPLALAAGAFLMQISVQGAWGVIP VHLNEISPDEIRATFPGVVYQLGNLLASGNATMQASLAVSHDNNYAFALALVAGTVAVVIAVLILFSRERRGIDMTQSVN TRTAAT
Sequences:
>Translated_406_residues MSWTREQRNVTIAAYLGWTLDAFDFFLMVFVLKDIAAEFASTIPAVAFALTLTLAMRPLGALIFGRLADRFGRRPTPMVN IACYSVLELASGFAPSLTALLVLRALFGIAMGGEWGVGSALTMETVPTHARGIVSGLLQAGYPSGYLLASIVFGLFYQYI GWRGMFMIGVLPALLVLYVRAHVPESPAWKQMEKRERPSLATTLQRNWKLTIYAIVLMTAFNFFSHGTQDLYPTFLREQH HFDPHTVSWITIVLNIGAIVGGLAFGAISERIGRRRAIFIAALIALPVLPLWAFSSGPLALAAGAFLMQISVQGAWGVIP VHLNEISPDEIRATFPGVVYQLGNLLASGNATMQASLAVSHDNNYAFALALVAGTVAVVIAVLILFSRERRGIDMTQSVN TRTAAT >Mature_405_residues SWTREQRNVTIAAYLGWTLDAFDFFLMVFVLKDIAAEFASTIPAVAFALTLTLAMRPLGALIFGRLADRFGRRPTPMVNI ACYSVLELASGFAPSLTALLVLRALFGIAMGGEWGVGSALTMETVPTHARGIVSGLLQAGYPSGYLLASIVFGLFYQYIG WRGMFMIGVLPALLVLYVRAHVPESPAWKQMEKRERPSLATTLQRNWKLTIYAIVLMTAFNFFSHGTQDLYPTFLREQHH FDPHTVSWITIVLNIGAIVGGLAFGAISERIGRRRAIFIAALIALPVLPLWAFSSGPLALAAGAFLMQISVQGAWGVIPV HLNEISPDEIRATFPGVVYQLGNLLASGNATMQASLAVSHDNNYAFALALVAGTVAVVIAVLILFSRERRGIDMTQSVNT RTAAT
Specific function: May be a sugar-cation symporter involved in sialic acid uptake [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter family. Sialic acid transporter (TC 2.A.1.12.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082404, Length=351, Percent_Identity=28.7749287749288, Blast_Score=158, Evalue=6e-40, Organism=Escherichia coli, GI87082231, Length=455, Percent_Identity=26.8131868131868, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1790550, Length=394, Percent_Identity=25.8883248730964, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788292, Length=449, Percent_Identity=24.9443207126949, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1786229, Length=386, Percent_Identity=24.8704663212435, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI87081723, Length=341, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789941, Length=434, Percent_Identity=24.8847926267281, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1788942, Length=429, Percent_Identity=24.2424242424242, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17542342, Length=132, Percent_Identity=35.6060606060606, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322632, Length=440, Percent_Identity=28.4090909090909, Blast_Score=172, Evalue=8e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004742 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44152; Mature: 44021
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWTREQRNVTIAAYLGWTLDAFDFFLMVFVLKDIAAEFASTIPAVAFALTLTLAMRPLG CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIFGRLADRFGRRPTPMVNIACYSVLELASGFAPSLTALLVLRALFGIAMGGEWGVGSA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE LTMETVPTHARGIVSGLLQAGYPSGYLLASIVFGLFYQYIGWRGMFMIGVLPALLVLYVR EEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHVPESPAWKQMEKRERPSLATTLQRNWKLTIYAIVLMTAFNFFSHGTQDLYPTFLREQH HCCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC HFDPHTVSWITIVLNIGAIVGGLAFGAISERIGRRRAIFIAALIALPVLPLWAFSSGPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHH LAAGAFLMQISVQGAWGVIPVHLNEISPDEIRATFPGVVYQLGNLLASGNATMQASLAVS HHHHHHHEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE HDNNYAFALALVAGTVAVVIAVLILFSRERRGIDMTQSVNTRTAAT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure SWTREQRNVTIAAYLGWTLDAFDFFLMVFVLKDIAAEFASTIPAVAFALTLTLAMRPLG CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIFGRLADRFGRRPTPMVNIACYSVLELASGFAPSLTALLVLRALFGIAMGGEWGVGSA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE LTMETVPTHARGIVSGLLQAGYPSGYLLASIVFGLFYQYIGWRGMFMIGVLPALLVLYVR EEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHVPESPAWKQMEKRERPSLATTLQRNWKLTIYAIVLMTAFNFFSHGTQDLYPTFLREQH HCCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC HFDPHTVSWITIVLNIGAIVGGLAFGAISERIGRRRAIFIAALIALPVLPLWAFSSGPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHH LAAGAFLMQISVQGAWGVIPVHLNEISPDEIRATFPGVVYQLGNLLASGNATMQASLAVS HHHHHHHEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE HDNNYAFALALVAGTVAVVIAVLILFSRERRGIDMTQSVNTRTAAT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA