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The map label for this gene is yecS [H]

Identifier: 161524853

GI number: 161524853

Start: 1849117

End: 1849809

Strand: Direct

Name: yecS [H]

Synonym: Bmul_1680

Alternate gene names: 161524853

Gene position: 1849117-1849809 (Clockwise)

Preceding gene: 161524852

Following gene: 161524863

Centisome position: 53.62

GC content: 67.39

Gene sequence:

>693_bases
ATGTCGACCACGTCCCTGCTCGTCCAATCGCTGCCGGTGCTCGCCCAGGGCGCCGTTCTGACCGTCAAGTTCGCCGTGCT
CTCGATGGTGTTCGGCCTGCTCGGCGCCGTCGTGCTGGCGATGATGGGCATCCGGCAAGGCGAACCGCTGGAAGGCTTCG
AGCGCATCTGGGTCAATGCGCTCGCGTGGCTCGCGCGCGCCTACGTCAGCCTGATGCGCGGCACGCCGCTGCTCGTGCAG
ATCTTCGTGATCTACTACGGCCTGCCGAGCCTCGGCATCTCGCTCGATCCGACGCCGGCCGGCGTGATCGCGCTGTCCGC
AAACGTCGCCGCGTACATGTCCGAAAGCATGCGCGGCGCGATCAACGGGATCGCGCGCGGCCAGTGGCTCGCCGCGTACA
GTCTCGGCCTCTCGTGGGGGCAGACGCTGCGCTACGTGATCGGACCGCAGGCGCTGCGCATCGCGGTGCCGAGCCTGTCG
AACAGCCTGATCAGCCTGATCAAGGACACGTCGCTCGTGTCCGTCATCACCGTGACCGAGCTGCTGCGCAGCGCGCAGGA
AATGATCGCCGCGACCTATCAGCCGCTGCCGCTCTATCTCGCGGCGGCGGCCATCTACTGGGTGCTGTGCCAGATTCTCG
AGTGGGTGCAGCGCTGGTACGAGAAGCGCCTGTCGCTGCCGGCACGGCACTGA

Upstream 100 bases:

>100_bases
ACGGCGGACCGACAAGGGCGGCATCTGCAACGATGCCGCCCTTTGTTTTATTCGTCCGGTTTATGATTGCGCTTTCGCGC
ACGCATCCGTTCCGTATTCC

Downstream 100 bases:

>100_bases
CCGCGGCCGCGCGGCGGTCGCAGCGCCGCGTGCCGCACCGTCACTCGCCCGGATAACGGACGCCGAGCGCGGCGCGTGCC
GCGTCGGTCATCGCGATCAT

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSTTSLLVQSLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAWLARAYVSLMRGTPLLVQ
IFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLS
NSLISLIKDTSLVSVITVTELLRSAQEMIAATYQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPARH

Sequences:

>Translated_230_residues
MSTTSLLVQSLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAWLARAYVSLMRGTPLLVQ
IFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLS
NSLISLIKDTSLVSVITVTELLRSAQEMIAATYQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPARH
>Mature_229_residues
STTSLLVQSLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAWLARAYVSLMRGTPLLVQI
FVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSN
SLISLIKDTSLVSVITVTELLRSAQEMIAATYQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPARH

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=229, Percent_Identity=45.4148471615721, Blast_Score=196, Evalue=8e-52,
Organism=Escherichia coli, GI1787030, Length=220, Percent_Identity=37.2727272727273, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787086, Length=227, Percent_Identity=32.5991189427313, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1787087, Length=234, Percent_Identity=31.1965811965812, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788646, Length=230, Percent_Identity=28.695652173913, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=33.1775700934579, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1788645, Length=220, Percent_Identity=33.1818181818182, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI87082239, Length=171, Percent_Identity=34.5029239766082, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1786874, Length=182, Percent_Identity=28.021978021978, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI48994930, Length=171, Percent_Identity=29.8245614035088, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25023; Mature: 24892

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTSLLVQSLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNA
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAWLARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGA
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
INGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTE
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LLRSAQEMIAATYQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPARH
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STTSLLVQSLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNA
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LAWLARAYVSLMRGTPLLVQIFVIYYGLPSLGISLDPTPAGVIALSANVAAYMSESMRGA
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
INGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTE
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LLRSAQEMIAATYQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPARH
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]