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The map label for this gene is ytfH [C]

Identifier: 161524824

GI number: 161524824

Start: 1827224

End: 1827706

Strand: Direct

Name: ytfH [C]

Synonym: Bmul_1651

Alternate gene names: 161524824

Gene position: 1827224-1827706 (Clockwise)

Preceding gene: 161524821

Following gene: 161524826

Centisome position: 52.99

GC content: 68.94

Gene sequence:

>483_bases
ATGAAATGGGACGACATCGGCACGCTGAACTGTTCCGTCGCGCGCACGCTCGCCGTGCTCGGCGATCGCTGGACGATGCT
GATCCTGCGCAACGCGTTTCTCGGTTGTCGTCGCTTCGATGCATTCCAGGCGCAGCTCGGCCTCACGCGACACGTGCTTG
CTGATCGACTCGCACGGCTCGTCGACGAAGGCGTGCTCGCCAAACGCGCGTATCAGGAGCGGCCGCCGCGCTTCGAATAT
CGGCTGACCGAGAAAGGCCGCGACCTCTACCCGGCGCTGCTCGCACTGCTCGCGTGGGGCGACCGCTGGAAGGACGACGG
CCACGGGCCGCCACTGCAGCTGCGCCATCGCCGGTGTGGGCAGCTGATGCATGCGGTTGCCGTCTGTTCGGCATGCGGCG
AGCCGCTCGACCCGCGCGACGTGACGCCTGAGCCCGGGCCGGGATGGGTCGCGCCCGAGTCGGGCGAGGTGCGCGACGCG
TGA

Upstream 100 bases:

>100_bases
CAGGGACGTCGGCGATGTCAATCGGTGGCGCGTGCGGTGCGCTTGAACGCGCACTCTATAATCGCCCGCTGTTTCGCTGA
ACTGCGCAGGAGATACGACG

Downstream 100 bases:

>100_bases
CGTTGCGCGTTTCGTTGACGAAGCATCGCGTGCGGCGCGTTGCGTCGTCACGTCGCGCGCTCGTCGGGACGCTCGCGATT
CGTTGACGAAGCATCGCGCG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKWDDIGTLNCSVARTLAVLGDRWTMLILRNAFLGCRRFDAFQAQLGLTRHVLADRLARLVDEGVLAKRAYQERPPRFEY
RLTEKGRDLYPALLALLAWGDRWKDDGHGPPLQLRHRRCGQLMHAVAVCSACGEPLDPRDVTPEPGPGWVAPESGEVRDA

Sequences:

>Translated_160_residues
MKWDDIGTLNCSVARTLAVLGDRWTMLILRNAFLGCRRFDAFQAQLGLTRHVLADRLARLVDEGVLAKRAYQERPPRFEY
RLTEKGRDLYPALLALLAWGDRWKDDGHGPPLQLRHRRCGQLMHAVAVCSACGEPLDPRDVTPEPGPGWVAPESGEVRDA
>Mature_160_residues
MKWDDIGTLNCSVARTLAVLGDRWTMLILRNAFLGCRRFDAFQAQLGLTRHVLADRLARLVDEGVLAKRAYQERPPRFEY
RLTEKGRDLYPALLALLAWGDRWKDDGHGPPLQLRHRRCGQLMHAVAVCSACGEPLDPRDVTPEPGPGWVAPESGEVRDA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 18014; Mature: 18014

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWDDIGTLNCSVARTLAVLGDRWTMLILRNAFLGCRRFDAFQAQLGLTRHVLADRLARL
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDEGVLAKRAYQERPPRFEYRLTEKGRDLYPALLALLAWGDRWKDDGHGPPLQLRHRRCG
HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
QLMHAVAVCSACGEPLDPRDVTPEPGPGWVAPESGEVRDA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKWDDIGTLNCSVARTLAVLGDRWTMLILRNAFLGCRRFDAFQAQLGLTRHVLADRLARL
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDEGVLAKRAYQERPPRFEYRLTEKGRDLYPALLALLAWGDRWKDDGHGPPLQLRHRRCG
HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
QLMHAVAVCSACGEPLDPRDVTPEPGPGWVAPESGEVRDA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]