Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is yyaJ [H]
Identifier: 161524724
GI number: 161524724
Start: 1702101
End: 1703558
Strand: Direct
Name: yyaJ [H]
Synonym: Bmul_1551
Alternate gene names: 161524724
Gene position: 1702101-1703558 (Clockwise)
Preceding gene: 161524719
Following gene: 161524730
Centisome position: 49.36
GC content: 68.38
Gene sequence:
>1458_bases ATGACCAGCCCTTCCCTCGATCTCGGCGGCCGCGCGGCGCCGCCCGCACCCGCGTCCCCGCCTGCCGCCCGCTCCGCCGC CGAGCCGGCTCCCGTTCCTGCGCGCGAGGTCACGCTCGGCGCTTTCATGGACGACCTGCCGGTCGGCGCGCTGCACCGGT TCGTCGTCTGGGTGATCGGGATCGGCCTGTTCTTCGACATGTACGAGATCTTTCTCGTCAGCACGATCGGCTCCGCGCTG CAAAGCGAATTCGGGCTGAACCGCGAGAGTGCCGATTTCAAGCTGCTGCTCGCCTCCGCGTTCATCGGGATGTTCGTCGG CGCGATGTGCCTCGGCAGCGTCGCGGATCGCATCGGGCGCCGTCGCGCGTTCCTGCTGACGCTCGTCTGGTACAGCGCGT TCTCGCTGATCGGCGCGTTCGCGGTAAACGCCGACATGCTCGTCGCGTGCCGCTTCCTGACCGGCATCGGCGTCGGCGCG ATCTACCCCGTCGCGGACAGCTTCCTGTCCGAAATCCTGCCGAAGGACAAGCGCGGACGGCTCGCGGCGTGGGCGTACAC GACGTCGTATGTCGCCGTGCCGCTCGTCGGCTTTCTCGCGCTGTGGCTCAACCCTCTGCACGTCGGCAGCGTGGCCGGCT GGCGCATCATTCTGGCGATCGGCAGCCTCGGCGCGGTGTACGTGTTGCTCGTACGGCATCGGCTGCCGGAAAGCCCGCGC TGGCTGCTCGCGCAGGGGCGCGACGACGAAGCGTACGCGACGCTACGGCGCTTCGCGGACAGCGCCGGCGTACGCATGCC CGAACGCTTCGCCCCGCCCGTCGAACCGCAGCGGCCGCTCGCGCTCGGCGAACGCCTCGCGTTGCTGCGCCGCCGGCCGT ACGGCGCGCGCTATGCGATGCTCGTGATCTTCCACCTGTTCCAGGGCTTCGGCTACTACGGCTTCGGCACGCTCGCGGGC GTCGTCGTCAAAAGCCGCGGCTTCGACGTGACGGACAGCACGCTGTTCCTCGCGCTGTCGTTTCTCGGCTATCCGCTCGG CTCGCTGCTGTCGATTCCGTTGTTCCATCGCATCGAGCGCCGCACGCTCGTGATCGCGTCGATCCTGTCGATCGCCGCGT TCGGGCTCTGTTTCGCGTATTCGAACCATACGGTGCTGATCGTCTGCTTCGGCGTATTGACGACCTGCGCGTCGAACGTG TTCAGCAACGCGTATCACGTCTATCAGGCCGAGATCTTTCCCGCGCGCGTACGCTCGACGGCGATCGGCAGCACGTACGC GCTGTCGCGCATCGTCAGCGGCGCGCTGCCGTTCGTGCTGCTGCCGGTGCTCGTGCGCGGCGGCGCGGGCGCGATGTTCG GCACGATCTCGGTCGCGCTCGCGATCGTCGCGATCACGCTGCGCGTGCTCGGGCCGCTGACCACGCGCCGTAGCCAGGAC GAGATCAATCCGGTGTGA
Upstream 100 bases:
>100_bases GCGCGGCGCGGGCATGACGCGATTCGCATGGCCGGCGCGCCGTTGTGCCGGCCGCCGCCGACCGGGCGCGATGCCCGGCG TTCCAACAATCGGAGACATG
Downstream 100 bases:
>100_bases CGAATCGGGCGCGTCGCGCGTCGCGCGCCGCCCGGCCGTTTGCGTGTCGGCGCCTCAGCGTGCCGACATGAAGTCGAAAA GCTTCGCGATGTCGGAGGTC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MTSPSLDLGGRAAPPAPASPPAARSAAEPAPVPAREVTLGAFMDDLPVGALHRFVVWVIGIGLFFDMYEIFLVSTIGSAL QSEFGLNRESADFKLLLASAFIGMFVGAMCLGSVADRIGRRRAFLLTLVWYSAFSLIGAFAVNADMLVACRFLTGIGVGA IYPVADSFLSEILPKDKRGRLAAWAYTTSYVAVPLVGFLALWLNPLHVGSVAGWRIILAIGSLGAVYVLLVRHRLPESPR WLLAQGRDDEAYATLRRFADSAGVRMPERFAPPVEPQRPLALGERLALLRRRPYGARYAMLVIFHLFQGFGYYGFGTLAG VVVKSRGFDVTDSTLFLALSFLGYPLGSLLSIPLFHRIERRTLVIASILSIAAFGLCFAYSNHTVLIVCFGVLTTCASNV FSNAYHVYQAEIFPARVRSTAIGSTYALSRIVSGALPFVLLPVLVRGGAGAMFGTISVALAIVAITLRVLGPLTTRRSQD EINPV
Sequences:
>Translated_485_residues MTSPSLDLGGRAAPPAPASPPAARSAAEPAPVPAREVTLGAFMDDLPVGALHRFVVWVIGIGLFFDMYEIFLVSTIGSAL QSEFGLNRESADFKLLLASAFIGMFVGAMCLGSVADRIGRRRAFLLTLVWYSAFSLIGAFAVNADMLVACRFLTGIGVGA IYPVADSFLSEILPKDKRGRLAAWAYTTSYVAVPLVGFLALWLNPLHVGSVAGWRIILAIGSLGAVYVLLVRHRLPESPR WLLAQGRDDEAYATLRRFADSAGVRMPERFAPPVEPQRPLALGERLALLRRRPYGARYAMLVIFHLFQGFGYYGFGTLAG VVVKSRGFDVTDSTLFLALSFLGYPLGSLLSIPLFHRIERRTLVIASILSIAAFGLCFAYSNHTVLIVCFGVLTTCASNV FSNAYHVYQAEIFPARVRSTAIGSTYALSRIVSGALPFVLLPVLVRGGAGAMFGTISVALAIVAITLRVLGPLTTRRSQD EINPV >Mature_484_residues TSPSLDLGGRAAPPAPASPPAARSAAEPAPVPAREVTLGAFMDDLPVGALHRFVVWVIGIGLFFDMYEIFLVSTIGSALQ SEFGLNRESADFKLLLASAFIGMFVGAMCLGSVADRIGRRRAFLLTLVWYSAFSLIGAFAVNADMLVACRFLTGIGVGAI YPVADSFLSEILPKDKRGRLAAWAYTTSYVAVPLVGFLALWLNPLHVGSVAGWRIILAIGSLGAVYVLLVRHRLPESPRW LLAQGRDDEAYATLRRFADSAGVRMPERFAPPVEPQRPLALGERLALLRRRPYGARYAMLVIFHLFQGFGYYGFGTLAGV VVKSRGFDVTDSTLFLALSFLGYPLGSLLSIPLFHRIERRTLVIASILSIAAFGLCFAYSNHTVLIVCFGVLTTCASNVF SNAYHVYQAEIFPARVRSTAIGSTYALSRIVSGALPFVLLPVLVRGGAGAMFGTISVALAIVAITLRVLGPLTTRRSQDE INPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI7662270, Length=354, Percent_Identity=23.4463276836158, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI4507005, Length=413, Percent_Identity=26.3922518159806, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI213021148, Length=507, Percent_Identity=25.0493096646943, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI216548223, Length=175, Percent_Identity=29.7142857142857, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI24497490, Length=408, Percent_Identity=25, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI262399383, Length=255, Percent_Identity=23.921568627451, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI166064021, Length=368, Percent_Identity=25, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI24308167, Length=471, Percent_Identity=22.7176220806794, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI73695465, Length=268, Percent_Identity=23.8805970149254, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI302148518, Length=242, Percent_Identity=25.6198347107438, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI90669191, Length=417, Percent_Identity=27.8177458033573, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI24497497, Length=401, Percent_Identity=27.431421446384, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI166197673, Length=373, Percent_Identity=25.201072386059, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI20070188, Length=388, Percent_Identity=23.1958762886598, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI24497476, Length=388, Percent_Identity=23.1958762886598, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1788074, Length=432, Percent_Identity=27.0833333333333, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1786229, Length=398, Percent_Identity=28.1407035175879, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI87082159, Length=412, Percent_Identity=29.126213592233, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788068, Length=465, Percent_Identity=23.6559139784946, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87082404, Length=197, Percent_Identity=26.3959390862944, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1789207, Length=251, Percent_Identity=26.2948207171315, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI87082231, Length=181, Percent_Identity=27.6243093922652, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790463, Length=199, Percent_Identity=29.1457286432161, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1789312, Length=183, Percent_Identity=27.8688524590164, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32564663, Length=437, Percent_Identity=23.5697940503432, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17565976, Length=350, Percent_Identity=25.1428571428571, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32565921, Length=190, Percent_Identity=31.0526315789474, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71988651, Length=303, Percent_Identity=26.0726072607261, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25145172, Length=189, Percent_Identity=24.3386243386243, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193202825, Length=193, Percent_Identity=25.9067357512953, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71986689, Length=193, Percent_Identity=25.9067357512953, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17560496, Length=382, Percent_Identity=23.5602094240838, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322247, Length=361, Percent_Identity=24.6537396121884, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640198, Length=234, Percent_Identity=29.4871794871795, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24640196, Length=234, Percent_Identity=29.4871794871795, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24640200, Length=234, Percent_Identity=29.4871794871795, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI19922874, Length=457, Percent_Identity=23.4135667396061, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI161077756, Length=244, Percent_Identity=27.4590163934426, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24649618, Length=353, Percent_Identity=24.6458923512748, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24652795, Length=398, Percent_Identity=25.1256281407035, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24652793, Length=398, Percent_Identity=25.1256281407035, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24668456, Length=378, Percent_Identity=26.4550264550265, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI19922616, Length=393, Percent_Identity=24.1730279898219, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI281362546, Length=289, Percent_Identity=25.2595155709343, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 52282; Mature: 52151
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPSLDLGGRAAPPAPASPPAARSAAEPAPVPAREVTLGAFMDDLPVGALHRFVVWVIG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH IGLFFDMYEIFLVSTIGSALQSEFGLNRESADFKLLLASAFIGMFVGAMCLGSVADRIGR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRAFLLTLVWYSAFSLIGAFAVNADMLVACRFLTGIGVGAIYPVADSFLSEILPKDKRGR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC LAAWAYTTSYVAVPLVGFLALWLNPLHVGSVAGWRIILAIGSLGAVYVLLVRHRLPESPR EEEEEHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WLLAQGRDDEAYATLRRFADSAGVRMPERFAPPVEPQRPLALGERLALLRRRPYGARYAM EEEECCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH LVIFHLFQGFGYYGFGTLAGVVVKSRGFDVTDSTLFLALSFLGYPLGSLLSIPLFHRIER HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RTLVIASILSIAAFGLCFAYSNHTVLIVCFGVLTTCASNVFSNAYHVYQAEIFPARVRST HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGSTYALSRIVSGALPFVLLPVLVRGGAGAMFGTISVALAIVAITLRVLGPLTTRRSQD HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EINPV CCCCC >Mature Secondary Structure TSPSLDLGGRAAPPAPASPPAARSAAEPAPVPAREVTLGAFMDDLPVGALHRFVVWVIG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH IGLFFDMYEIFLVSTIGSALQSEFGLNRESADFKLLLASAFIGMFVGAMCLGSVADRIGR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRAFLLTLVWYSAFSLIGAFAVNADMLVACRFLTGIGVGAIYPVADSFLSEILPKDKRGR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC LAAWAYTTSYVAVPLVGFLALWLNPLHVGSVAGWRIILAIGSLGAVYVLLVRHRLPESPR EEEEEHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WLLAQGRDDEAYATLRRFADSAGVRMPERFAPPVEPQRPLALGERLALLRRRPYGARYAM EEEECCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH LVIFHLFQGFGYYGFGTLAGVVVKSRGFDVTDSTLFLALSFLGYPLGSLLSIPLFHRIER HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RTLVIASILSIAAFGLCFAYSNHTVLIVCFGVLTTCASNVFSNAYHVYQAEIFPARVRST HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGSTYALSRIVSGALPFVLLPVLVRGGAGAMFGTISVALAIVAITLRVLGPLTTRRSQD HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EINPV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]