| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is yoaA [H]
Identifier: 161524652
GI number: 161524652
Start: 1628192
End: 1630444
Strand: Direct
Name: yoaA [H]
Synonym: Bmul_1479
Alternate gene names: 161524652
Gene position: 1628192-1630444 (Clockwise)
Preceding gene: 161524651
Following gene: 161524654
Centisome position: 47.21
GC content: 69.46
Gene sequence:
>2253_bases TTGAATTCACCGCTTGAAGCCACCCCCGATGCCCGGCGCGACGCGTCGCCCGGGCGCGTTCGTGCGTCCGAAGGCACCTT CGAACTGAGCCGCAAGCGCGTCGACGAACTCGACGCGATTTTCGGCGACGGCGGGTTGCTGGCGCGCGCGCTCGACGGCT ATCGTCCGCGCGCATCGCAGATCGAGATGGCGCGTGCGGTCGCGTCCGCGATGGAGGCGTCCGCGCGCCGGATGCCGGAG CCGGAAATCTTCGAAGCGCGCAAGCGGCCGGCGCGCCGGCTCGGCGAAACGGGCGGCGCGGGCGGTGCCGCCGACGCCGG TGCGAGCGACGCCGCGAACGAAGCGGACGCCGATGCCGGCGACAACACGCTGATCGTCGAGGCCGGCACCGGCACGGGCA AGACCTATGCGTATCTCGTCCCGGCGATGCTGTGGGGCGGCAAGGTGATCGTGTCGACCGGCACGAAGCATCTGCAGGAC CAGCTGTTCCTGCGCGACATCCCGACCGTGCGCAACGCGCTCGCGGTGCCGGTGACGGTCGCGATGCTGAAGGGTCGCGC GAACTATCTGTGCCACTACTATCTGCAGCGCACCGCGGACAACGGCCGCCTGCCGTCGCGGCAGGACACCGCGTATCTGC AGGAGATCGTCCGTTTCGCGAAGATCACGAAAAGCGGCGACAAGGCCGAGCTCGCGAGCGTGCCGGAGACGGCGCCCGTA TGGTCGATGGTCACGTCGACGCGCGACAACTGCCTCGGCCAGGAGTGTCCGCACTACAAGGAATGCTTCGTGATGCAGGC GCGGCGCGAAGCACAGCAGGCCGACATCGTCGTCGTCAACCATCACCTGTTCTTCGCGGACATCATGCTGCGCGACACCG GCATGGCCGAGCTGCTGCCGAATGCGAACACGGTGATCTTCGACGAAGCGCATCAGCTGCCGGAGACGGCGACGCTGTTT TTCGGCGAGACGCTGTCGACGACGCAGATTCTCGAACTCGCACGTGACACGGTCGCCGAGGGGCTCAGTCACGCGCGCGA CGCTGTCGAATGGGTGAAGCTCGGCGGCGCGCTCGAACGCGCGGCGCGCGACGTGCGGCTCGCGTTCGCCGACGATCAGA TCGTGCGGATGTCGCTCGCGCAACTCGGCGACGATCATCCGCTGTTTGCCGCACTCGATGCGCTCGAAGCGGCGCTCGAC GCGCTGGCTTCTGCGCTCGCGAGTCAGGCCGAGCGCGCGGAATCGCTCGGCGCGTGCCTGCGGCGCGCGCGCGAGCTGCA GGATCTGCTCGCGGGCTGGGTCGCGCCCGGCGCGGCCGAGGCCGCTGCACAGGCCGATGCGGCCGCCGCCGGCGATGCGG CAGCCGCGGCCGGCGATCCGAACGAGAAGGTGCGCTGGGTCGAGGTGTTCGCGCATACGGTGCAACTGCACGAAACGCCG CTGTCGGTCGCGCCGATCTTCGCGAAGCAGCGCGCGGGCGTGCCGCGCGCGTGGATCTTCACGTCGGCGACGCTGTCGGT GCGCGGCGACTTCACGCACTACGCGGCGCAGATGGGCCTGAGCTCGCGCCGTTCGATGACGCTCGCGAGCCCGTTCGACT ATCAGACGCAGGGGCTGCTGTACGTGCCGCGCAATTTGCCGCAGCCGTCGTCGCCGGCGTTTACCGATGCCGTGTTCGAT GCGGCGCTGCCGGCCATCGAGGCCGCGGGCGGCGGCGTGTTCATGCTGTGCACGACATTGCGTGCGGTCGACCGGATCGC CTCGAAACTGCGCGACGTGATCGAATCGCGCGGCTGGAACACGCCGCTGCTCGTGCAGGGCGATGCGAGCCGGACCGAAC TGCTCGATCGCTTCCGTGCGTACGGCAATGCGATCCTCGTCGGCAGCCAGAGCTTCTGGGAAGGCGTCGACGTGCGCGGC GACGCGCTGTCGCTCGTCGTGATCGACAAGCTGCCGTTCGCGCCGCCCGACGATCCGGTGCTGGCCGCGCGGCTCGACGC GCTCGCGAAGAAGGGCTTGAGCCCGTTCGCCGTGCATCAGCTGCCGCAGGCCGTCATCACGCTGAAGCAGGGCGCCGGGC GGCTGATCCGTGCGGAGACCGATCGCGGCGTGCTGATGATCTGCGACACGCGGCTCGTCGACAAGCCGTACGGCCGCCGG ATCTGGCAGAGCCTGCCGCCGTTCAAGCGCACGCGCGAAATCGCGGTCGTGCAGGACTTCTTCGACGAGCAGCGCGCCGC GCGTCGCGCCTGA
Upstream 100 bases:
>100_bases ATCATCATGCTGCAATCGCAGCTCGAACCGGATAAGCGCGCCTGAGCGCGGCCTGGCAAGCGCCGGCGCCGCCCGGGCGC TGGATACAGGAACGCTTGCC
Downstream 100 bases:
>100_bases CGGCAAGGGCGGCCCGTGCGGCCGCCGCCGGTCGCGTTGACCTCGGTCGGCGTCTCGCACCAATGAAAAACCCGGCTCGC AGGCCGGGTTTTTCTATGGC
Product: helicase c2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MNSPLEATPDARRDASPGRVRASEGTFELSRKRVDELDAIFGDGGLLARALDGYRPRASQIEMARAVASAMEASARRMPE PEIFEARKRPARRLGETGGAGGAADAGASDAANEADADAGDNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQD QLFLRDIPTVRNALAVPVTVAMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQEIVRFAKITKSGDKAELASVPETAPV WSMVTSTRDNCLGQECPHYKECFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLPNANTVIFDEAHQLPETATLF FGETLSTTQILELARDTVAEGLSHARDAVEWVKLGGALERAARDVRLAFADDQIVRMSLAQLGDDHPLFAALDALEAALD ALASALASQAERAESLGACLRRARELQDLLAGWVAPGAAEAAAQADAAAAGDAAAAAGDPNEKVRWVEVFAHTVQLHETP LSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLASPFDYQTQGLLYVPRNLPQPSSPAFTDAVFD AALPAIEAAGGGVFMLCTTLRAVDRIASKLRDVIESRGWNTPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDVRG DALSLVVIDKLPFAPPDDPVLAARLDALAKKGLSPFAVHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYGRR IWQSLPPFKRTREIAVVQDFFDEQRAARRA
Sequences:
>Translated_750_residues MNSPLEATPDARRDASPGRVRASEGTFELSRKRVDELDAIFGDGGLLARALDGYRPRASQIEMARAVASAMEASARRMPE PEIFEARKRPARRLGETGGAGGAADAGASDAANEADADAGDNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQD QLFLRDIPTVRNALAVPVTVAMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQEIVRFAKITKSGDKAELASVPETAPV WSMVTSTRDNCLGQECPHYKECFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLPNANTVIFDEAHQLPETATLF FGETLSTTQILELARDTVAEGLSHARDAVEWVKLGGALERAARDVRLAFADDQIVRMSLAQLGDDHPLFAALDALEAALD ALASALASQAERAESLGACLRRARELQDLLAGWVAPGAAEAAAQADAAAAGDAAAAAGDPNEKVRWVEVFAHTVQLHETP LSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLASPFDYQTQGLLYVPRNLPQPSSPAFTDAVFD AALPAIEAAGGGVFMLCTTLRAVDRIASKLRDVIESRGWNTPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDVRG DALSLVVIDKLPFAPPDDPVLAARLDALAKKGLSPFAVHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYGRR IWQSLPPFKRTREIAVVQDFFDEQRAARRA >Mature_750_residues MNSPLEATPDARRDASPGRVRASEGTFELSRKRVDELDAIFGDGGLLARALDGYRPRASQIEMARAVASAMEASARRMPE PEIFEARKRPARRLGETGGAGGAADAGASDAANEADADAGDNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQD QLFLRDIPTVRNALAVPVTVAMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQEIVRFAKITKSGDKAELASVPETAPV WSMVTSTRDNCLGQECPHYKECFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLPNANTVIFDEAHQLPETATLF FGETLSTTQILELARDTVAEGLSHARDAVEWVKLGGALERAARDVRLAFADDQIVRMSLAQLGDDHPLFAALDALEAALD ALASALASQAERAESLGACLRRARELQDLLAGWVAPGAAEAAAQADAAAAGDAAAAAGDPNEKVRWVEVFAHTVQLHETP LSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLASPFDYQTQGLLYVPRNLPQPSSPAFTDAVFD AALPAIEAAGGGVFMLCTTLRAVDRIASKLRDVIESRGWNTPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDVRG DALSLVVIDKLPFAPPDDPVLAARLDALAKKGLSPFAVHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYGRR IWQSLPPFKRTREIAVVQDFFDEQRAARRA
Specific function: Unknown
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase ATP-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=707, Percent_Identity=41.3012729844413, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI1787018, Length=241, Percent_Identity=35.6846473029046, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR010614 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR006935 [H]
Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 81089; Mature: 81089
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPLEATPDARRDASPGRVRASEGTFELSRKRVDELDAIFGDGGLLARALDGYRPRASQ CCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHH IEMARAVASAMEASARRMPEPEIFEARKRPARRLGETGGAGGAADAGASDAANEADADAG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQDQLFLRDIPTVRNALAVPVTV CCEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHH AMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQEIVRFAKITKSGDKAELASVPETAPV HHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHH WSMVTSTRDNCLGQECPHYKECFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHCCCHHHHCC NANTVIFDEAHQLPETATLFFGETLSTTQILELARDTVAEGLSHARDAVEWVKLGGALER CCCEEEECCHHCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARDVRLAFADDQIVRMSLAQLGDDHPLFAALDALEAALDALASALASQAERAESLGACL HHHHHEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRARELQDLLAGWVAPGAAEAAAQADAAAAGDAAAAAGDPNEKVRWVEVFAHTVQLHETP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCC LSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLASPFDYQTQGLL CCHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCEE YVPRNLPQPSSPAFTDAVFDAALPAIEAAGGGVFMLCTTLRAVDRIASKLRDVIESRGWN EECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC TPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDVRGDALSLVVIDKLPFAPPDDPV CCEEEECCCHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCH LAARLDALAKKGLSPFAVHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYGRR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHCCCHHHH IWQSLPPFKRTREIAVVQDFFDEQRAARRA HHHHCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSPLEATPDARRDASPGRVRASEGTFELSRKRVDELDAIFGDGGLLARALDGYRPRASQ CCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHH IEMARAVASAMEASARRMPEPEIFEARKRPARRLGETGGAGGAADAGASDAANEADADAG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC DNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQDQLFLRDIPTVRNALAVPVTV CCEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHH AMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQEIVRFAKITKSGDKAELASVPETAPV HHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHH WSMVTSTRDNCLGQECPHYKECFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHCCCHHHHCC NANTVIFDEAHQLPETATLFFGETLSTTQILELARDTVAEGLSHARDAVEWVKLGGALER CCCEEEECCHHCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARDVRLAFADDQIVRMSLAQLGDDHPLFAALDALEAALDALASALASQAERAESLGACL HHHHHEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRARELQDLLAGWVAPGAAEAAAQADAAAAGDAAAAAGDPNEKVRWVEVFAHTVQLHETP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCC LSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLASPFDYQTQGLL CCHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCEE YVPRNLPQPSSPAFTDAVFDAALPAIEAAGGGVFMLCTTLRAVDRIASKLRDVIESRGWN EECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC TPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDVRGDALSLVVIDKLPFAPPDDPV CCEEEECCCHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCH LAARLDALAKKGLSPFAVHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYGRR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHCCCHHHH IWQSLPPFKRTREIAVVQDFFDEQRAARRA HHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]