Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is hisS [H]
Identifier: 161524637
GI number: 161524637
Start: 1610011
End: 1611351
Strand: Direct
Name: hisS [H]
Synonym: Bmul_1464
Alternate gene names: 161524637
Gene position: 1610011-1611351 (Clockwise)
Preceding gene: 161524636
Following gene: 161524638
Centisome position: 46.69
GC content: 64.13
Gene sequence:
>1341_bases ATGACTGAACAGAAACGCAAGATCGAGAAGCTCACGGGCGTCAAGGGCATGAACGACATCCTGCCGCAGGATGCCGGTCT GTGGGAGTTCTTCGAGTCCACCGTGAAATCGCTGTTGCGCGCGTACGGCTATCAGAACATCCGCACGCCGATCGTCGAGC ATACGCAGCTCTTCACGCGCGGCATCGGCGAAGTCACCGACATCGTCGAGAAGGAGATGTACAGCTTCACCGACGCGCTG AACGGCGAGCACCTGACGATGCGTCCGGAGAACACCGCGGCGGTCGTGCGCGCGGCGATCGAGCACAACATGCTGTACGA CGGCCCGAAGCGCCTCTGGTACATCGGCCCGATGTTCCGTCACGAGCGTCCGCAGCGCGGCCGCTATCGGCAGTTCCATC AGGTCGGCGTCGAGGCGCTCGGCTTCGCGGGTCCCGATGCGGATGCCGAGATCATCATGATGTGCCAGCGTCTGTGGGAC GACCTCGGGCTGACCGGCATCAAGCTCGAGATCAACTCGCTCGGCCTCGCCGAAGAGCGTGCAGCGCATCGCGTCGAACT GATCAAGTATCTCGAGCAGCACGTCGACGCGCTCGACGAAGATGCGAAGCGTCGTCTGTATACGAACCCGCTGCGCGTGC TCGACACGAAGAATCCGGCGCTGCAGGAAATCGCGCAGAACGCGCCGAAGCTGATCGACTTCCTCGGCGACACGTCGCGT GCGCACTTCGAGGGGCTGCAGCGCCTGCTGCTCGCGAACAACATTCCGTTCAAGATCAATCCGCGGCTCGTGCGCGGCCT CGACTACTACAACCTCACCGTGTTCGAGTGGGTCACCGACAAGCTCGGCGCGCAGGGTACCGTTGCGGCCGGCGGCCGTT ACGATCCGCTGATCGAGCAGCTCGGCGGCAAGCCGACGGCTGCGTGCGGCTGGGCGATGGGCATCGAGCGCATTCTCGAG CTGCTGAAGGAAGAGAACCTTGCGCCGGAGCAGGAAGGCGTCGACGTGTACGTCGTGCACCAGGGCGACGCGGCGCGCGA GCAGGCCTTCATCGCGGCCGAGCGTCTGCGCGATACGGGCCTCGACGTGATCTTCCACTGCAGCGCCGATGGCGCGCCGG CAAGCTTCAAGTCGCAGATGAAGCGCGCCGATGCGAGCGGCGCCGCATTCGCGGTGATCTTCGGCGAAGAAGAAGTCGCG AACGGCACGGTGGGCGTGAAAGCGCTGCGCGGCACGGGCGGCGACGGGGAAAAGAACGCTCAGCAGACCGTACCGGTCGA AAGCTTGACCGAATTCCTAATCAATGCGATGGTTGCATCCGCCGAAGACGGCGACGACTGA
Upstream 100 bases:
>100_bases CGGCGAGCGGATCGCCGAGGAATTCCAGCAGATCGTCAGCGACTATGTCGCACGCAATTACGGCCGCGCGGCGGCCACGA ACTAATTCGTCCACACACAG
Downstream 100 bases:
>100_bases TCGCGCTGGCGTTCGCTCGACAAGAAAAGGCCTGAACAGGAAGGAATCGCTCGCCGATGAGTTATCACGACGAACAAGAA TCGATTGAAAGTCTGAAAGC
Product: histidyl-tRNA synthetase
Products: NA
Alternate protein names: Histidine--tRNA ligase; HisRS [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDAL NGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWD DLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDALDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSR AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE LLKEENLAPEQEGVDVYVVHQGDAAREQAFIAAERLRDTGLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVA NGTVGVKALRGTGGDGEKNAQQTVPVESLTEFLINAMVASAEDGDD
Sequences:
>Translated_446_residues MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDAL NGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWD DLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDALDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSR AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE LLKEENLAPEQEGVDVYVVHQGDAAREQAFIAAERLRDTGLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVA NGTVGVKALRGTGGDGEKNAQQTVPVESLTEFLINAMVASAEDGDD >Mature_445_residues TEQKRKIEKLTGVKGMNDILPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTRGIGEVTDIVEKEMYSFTDALN GEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDD LGLTGIKLEINSLGLAEERAAHRVELIKYLEQHVDALDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSRA HFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILEL LKEENLAPEQEGVDVYVVHQGDAAREQAFIAAERLRDTGLDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVAN GTVGVKALRGTGGDGEKNAQQTVPVESLTEFLINAMVASAEDGDD
Specific function: Unknown
COG id: COG0124
COG function: function code J; Histidyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1788861, Length=420, Percent_Identity=54.5238095238095, Blast_Score=447, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR015807 - InterPro: IPR004516 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b [H]
EC number: =6.1.1.21 [H]
Molecular weight: Translated: 49528; Mature: 49397
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQKRKIEKLTGVKGMNDILPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTR CCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH GIGEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECHHHH HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH AAHRVELIKYLEQHVDALDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHCCHHHHHHHCCCCH AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ HHHHHHHHHHHHCCCCEEECHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHH LGGKPTAACGWAMGIERILELLKEENLAPEQEGVDVYVVHQGDAAREQAFIAAERLRDTG HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC LDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGTGGDGEKNA CCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCEEEEECCCCCCCCCC QQTVPVESLTEFLINAMVASAEDGDD HHCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEQKRKIEKLTGVKGMNDILPQDAGLWEFFESTVKSLLRAYGYQNIRTPIVEHTQLFTR CCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH GIGEVTDIVEKEMYSFTDALNGEHLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECHHHH HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLTGIKLEINSLGLAEER CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH AAHRVELIKYLEQHVDALDEDAKRRLYTNPLRVLDTKNPALQEIAQNAPKLIDFLGDTSR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHCCHHHHHHHCCCCH AHFEGLQRLLLANNIPFKINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ HHHHHHHHHHHHCCCCEEECHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHH LGGKPTAACGWAMGIERILELLKEENLAPEQEGVDVYVVHQGDAAREQAFIAAERLRDTG HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC LDVIFHCSADGAPASFKSQMKRADASGAAFAVIFGEEEVANGTVGVKALRGTGGDGEKNA CCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCEEEEECCCCCCCCCC QQTVPVESLTEFLINAMVASAEDGDD HHCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA