Click here to switch to the map view.

The map label for this gene is priB [H]

Identifier: 161524574

GI number: 161524574

Start: 1543940

End: 1544239

Strand: Direct

Name: priB [H]

Synonym: Bmul_1401

Alternate gene names: 161524574

Gene position: 1543940-1544239 (Clockwise)

Preceding gene: 161524573

Following gene: 161524575

Centisome position: 44.77

GC content: 62.67

Gene sequence:

>300_bases
GTGAACAGGTTGCAATTGACGGCAAGCGTCGTCGAGCGCGCAGCGGTGCGATACACGCCCGCCGGCGTTCCGATCGCGAG
CGCGACGTTGCAGCACCGCACGGAAGTCGTCGAAGCAGGCATTCCCCGTCAGGTCGAAATGACGATCGAGGCGGTGGCGG
CCGGCGACGCGAGCGGCAGGCTGGAGCAGTGTGAACTCGGCGTCGAGACGCTGTTCACGGGCTTCCTGGCAAAGAAAAGC
CGCAACGCGCGAACCTTGGTGTTTCACATCACAGCATTGCAGGACATTGGAAAGGACTGA

Upstream 100 bases:

>100_bases
AGTTCAGCGCGAAGAAGCCAAGAAGGCGGCTGCCGCTCAGCCGACCGAAGCGCAGGCTTAAGCTCGTCTCGATTAAGCCA
CCAAGGAGCACGCCACTCAC

Downstream 100 bases:

>100_bases
ACATGGCCCGCCCCACTGGTAAGAAATTCGACAAGCGTCGTCAGCAACAAAACCCGCTCTTCAAGCGCAAGAAGTTCTGC
CGCTTCACGGCAGCCGGTGT

Product: primosomal replication protein N-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNRLQLTASVVERAAVRYTPAGVPIASATLQHRTEVVEAGIPRQVEMTIEAVAAGDASGRLEQCELGVETLFTGFLAKKS
RNARTLVFHITALQDIGKD

Sequences:

>Translated_99_residues
MNRLQLTASVVERAAVRYTPAGVPIASATLQHRTEVVEAGIPRQVEMTIEAVAAGDASGRLEQCELGVETLFTGFLAKKS
RNARTLVFHITALQDIGKD
>Mature_99_residues
MNRLQLTASVVERAAVRYTPAGVPIASATLQHRTEVVEAGIPRQVEMTIEAVAAGDASGRLEQCELGVETLFTGFLAKKS
RNARTLVFHITALQDIGKD

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10663; Mature: 10663

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLQLTASVVERAAVRYTPAGVPIASATLQHRTEVVEAGIPRQVEMTIEAVAAGDASGR
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
LEQCELGVETLFTGFLAKKSRNARTLVFHITALQDIGKD
HHHHHHCHHHHHHHHHHHCCCCCEEEEEEEEEHHHCCCC
>Mature Secondary Structure
MNRLQLTASVVERAAVRYTPAGVPIASATLQHRTEVVEAGIPRQVEMTIEAVAAGDASGR
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
LEQCELGVETLFTGFLAKKSRNARTLVFHITALQDIGKD
HHHHHHCHHHHHHHHHHHCCCCCEEEEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]