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The map label for this gene is ybbN [H]

Identifier: 161523910

GI number: 161523910

Start: 802757

End: 803605

Strand: Reverse

Name: ybbN [H]

Synonym: Bmul_0730

Alternate gene names: 161523910

Gene position: 803605-802757 (Counterclockwise)

Preceding gene: 161523911

Following gene: 161523908

Centisome position: 23.3

GC content: 67.96

Gene sequence:

>849_bases
ATGGACACCACGCTAGCCACTTTCGAAAGAGACGTCATCGAGGCGTCGCTGGACACGCCCGTGCTGGTCGACTTCTGGGC
GCCGTGGTGCGGCCCGTGCAAGACGCTCGGCCCGCTCCTCGAAAAGCTCGAACGCGATTACGCGGGCCGCTGGAAGCTCG
TGAAGGTGAACGTCGACGAGAACCAGGAACTCGCCGCGCATTTCCAGACGCGCAGCATTCCGCACGTGATCGCGTTCGCC
GATGGTCGCCCCGTCGACCAGTTCATCGGCGTGCTGCCGGAAGGCCAGTTGCGCGCGTTCCTCGACCGGCTGCTGCCGGC
GCCGGAAGAAGCCGAGCGCCGCGCCGCGCAGATCGCGATCGCGGAAGCGCGCTTCGACGACGGGCTCGCGCACCTCGAAG
CGGCGCTCGCGCTGAATCCCGGTTTCGACGATGCGCGGCTCGACCTGATCGAGCTGCTCCTTGCGAGCAACCGGATCGAC
GATGCGCGCGCCGAAGCCGAGCGGCTGTCGCCGCAAACGGTGCAGGGCGCCGATCCGCGCTATCAGGCGATCAAGACCCG
TTTCGACGCGCTCGACGCAACGGCCGACCTGCCGCCGACCGACGCGCTCGAAGCGCGCATCGCGGCAAATCCCGGCGATC
TCGACGCGCGCTTCGATCTCGCGCAAAGCCTGATCGCGCGGCGCGCATACGAAGGCGCGCTCGAGCAGCTGCTGGAAATC
GTCACGCGCGACCGCACGTATGGCGACGACCTCGGCCGCCGCACGATGATCTCGGTGTTCGAGCTGGCTGCCGATCGTCC
GGATCTCGTCGCCGCGTGGCGACGCAAGCTGAGCATGGCGCTCAACTGA

Upstream 100 bases:

>100_bases
CCGGGCGAAACGGAATGGATTCCGCTACCGGAATCGAAGCCGCGTTGAAAAGCGCGCAAGATGCCCCCAATCTGACGACA
TCCGAACCGCAGGGAACGAC

Downstream 100 bases:

>100_bases
GCGCGGCAGGCAGGAAGCCGGGCGCTGCAGCGGCCGGCCTTCTGCTTGTGCGCACGCTGTTCCTGCACTGTTCCTGCGCT
GTTCGCACGCACCGCCGTCG

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MDTTLATFERDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLERDYAGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
DGRPVDQFIGVLPEGQLRAFLDRLLPAPEEAERRAAQIAIAEARFDDGLAHLEAALALNPGFDDARLDLIELLLASNRID
DARAEAERLSPQTVQGADPRYQAIKTRFDALDATADLPPTDALEARIAANPGDLDARFDLAQSLIARRAYEGALEQLLEI
VTRDRTYGDDLGRRTMISVFELAADRPDLVAAWRRKLSMALN

Sequences:

>Translated_282_residues
MDTTLATFERDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLERDYAGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
DGRPVDQFIGVLPEGQLRAFLDRLLPAPEEAERRAAQIAIAEARFDDGLAHLEAALALNPGFDDARLDLIELLLASNRID
DARAEAERLSPQTVQGADPRYQAIKTRFDALDATADLPPTDALEARIAANPGDLDARFDLAQSLIARRAYEGALEQLLEI
VTRDRTYGDDLGRRTMISVFELAADRPDLVAAWRRKLSMALN
>Mature_282_residues
MDTTLATFERDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLERDYAGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
DGRPVDQFIGVLPEGQLRAFLDRLLPAPEEAERRAAQIAIAEARFDDGLAHLEAALALNPGFDDARLDLIELLLASNRID
DARAEAERLSPQTVQGADPRYQAIKTRFDALDATADLPPTDALEARIAANPGDLDARFDLAQSLIARRAYEGALEQLLEI
VTRDRTYGDDLGRRTMISVFELAADRPDLVAAWRRKLSMALN

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI21361403, Length=98, Percent_Identity=42.8571428571429, Blast_Score=92, Evalue=4e-19,
Organism=Escherichia coli, GI87081747, Length=268, Percent_Identity=35.0746268656716, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI87082331, Length=96, Percent_Identity=40.625, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788936, Length=107, Percent_Identity=36.4485981308411, Blast_Score=90, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI212646193, Length=100, Percent_Identity=43, Blast_Score=85, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6321648, Length=85, Percent_Identity=37.6470588235294, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573567, Length=105, Percent_Identity=38.0952380952381, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24664269, Length=85, Percent_Identity=38.8235294117647, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24639826, Length=73, Percent_Identity=38.3561643835616, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24639068, Length=96, Percent_Identity=37.5, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21358065, Length=82, Percent_Identity=39.0243902439024, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31325; Mature: 31325

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTLATFERDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLERDYAGRWKLVKVNVDE
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC
NQELAAHFQTRSIPHVIAFADGRPVDQFIGVLPEGQLRAFLDRLLPAPEEAERRAAQIAI
CHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
AEARFDDGLAHLEAALALNPGFDDARLDLIELLLASNRIDDARAEAERLSPQTVQGADPR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHH
YQAIKTRFDALDATADLPPTDALEARIAANPGDLDARFDLAQSLIARRAYEGALEQLLEI
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTRDRTYGDDLGRRTMISVFELAADRPDLVAAWRRKLSMALN
HHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTTLATFERDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLERDYAGRWKLVKVNVDE
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC
NQELAAHFQTRSIPHVIAFADGRPVDQFIGVLPEGQLRAFLDRLLPAPEEAERRAAQIAI
CHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
AEARFDDGLAHLEAALALNPGFDDARLDLIELLLASNRIDDARAEAERLSPQTVQGADPR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHH
YQAIKTRFDALDATADLPPTDALEARIAANPGDLDARFDLAQSLIARRAYEGALEQLLEI
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTRDRTYGDDLGRRTMISVFELAADRPDLVAAWRRKLSMALN
HHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]