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The map label for this gene is alsB [C]

Identifier: 161523794

GI number: 161523794

Start: 672917

End: 673978

Strand: Reverse

Name: alsB [C]

Synonym: Bmul_0614

Alternate gene names: 161523794

Gene position: 673978-672917 (Counterclockwise)

Preceding gene: 161523798

Following gene: 161523793

Centisome position: 19.54

GC content: 73.45

Gene sequence:

>1062_bases
ATGGCCGACCCTTCCGGTCCGCGCTGGCGCAAGCGCACCGCGCGCTTCGACGAGATCGCCGCGCTCGCGGGCGTCAGCAC
GACGACCGTCGACCGCGTGCTGAACGAGCGCGGCAGCGTGTCGGCCCGCGCGCGCGAACGCGTGGTGGCGGCCGCGCGCC
AGCTCGGCGTGCCGCGCCAGCTGCCCGACACGCGGCACGGGCTCGTCCACGTCGACGTGCTGTTGCCCGACACCGACGCG
CCGTTCTTCCACCGGCTGCAGCAGGCGCTGCAGCGCTCGCTGCAGATGCTCGACCGGCGCGTCGTCGTGCACCGGACCAT
CGTCGCCGCCGCCGACGACGCGCGCGCCGCCGCGCTGATCGAACGTCCCGCATACCGGCGCGCGGCGCTGATCGTCACCG
CGCACGACACGCCGCGCGTGCGCGACGCGCTGACCGCCGCGATCGCGCGCGGCGAGCACGTCGTGACGATGGTGACGGAC
ATCGGCGGCATTGCGCGCGTCCACTATGCGGGCATCGACAACTACCGCGCCGGACGCACGGCCGGCTACTACATCGGCCG
GCTCGCCGCGCGGCCCGGACGCGTGCTGCTGCTCGGCGGCCGCATGGCTTACCGCGCGCACGCGCAGCGCATGGCCGGCT
GCATGGATCAGCTCGGCGAAGCGTTCGGCGCGTTGCGCTGCGATGCGCCGATCGAAACGCTCGACGACGACGACCGCTGC
TACCGCGCGGTCACGAACGCGTTGCGCGCGGGCGACGAGGTCGCCGCGATCTACAACAGCGGTGCCGGGTCGGCCGGCAT
CGAAGCGGCGCTGCGCAACGCGGGCGCGGCCGGCCGCGTCGTCTGGATCGGGCACGAGATGCTCGATCAGCACCGCGCGT
ATATCGAGGCCGGTTCGATGGACATCGCGATCGACCAGGACCCGGACGGTCAGGCGATCTCCGCGCTGCAGCACGTGCTG
CACGCGTGCGGCATCGTCGAGCAGCGGCCGCCCGGCGACCCCGTCGAATTCCGCGTGTTCTGCGCCGCGAACGTGCGCAC
GAGCGCGTATCTGCAGGCCTGA

Upstream 100 bases:

>100_bases
CCTGCCCCGCTCAATCGAAACGTTGACGAAATTTCGCCATCGCTTTAGCGTTGGCGCACAACGCCACGCCATGCTGGCGA
CGACAACGATGGAGACAACC

Downstream 100 bases:

>100_bases
CGCGGCTGCGCGGCGCGCGTGATGCCGCGCGCGGAAAAATCGACGGCCGCGTTGGCGATTTTTCGTCAACGTTCGTCATG
CAATGCGCGCCGCGCGGCCG

Product: LacI family transcription regulator

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein LacI Family; Transcriptional Regulator Protein; LacI Family Regulatory Protein; Regulatory Protein LacI Family; LacI Regulatory Protein; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Regulatory Protein; Transcriptional Regulator LacI Family Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; Transcription Regulator Protein; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; HTH-Type Transcriptional Repressor PurR; Transcriptional Regulatory Protein LacI Family; Transcription Regulator

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MADPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSARARERVVAAARQLGVPRQLPDTRHGLVHVDVLLPDTDA
PFFHRLQQALQRSLQMLDRRVVVHRTIVAAADDARAAALIERPAYRRAALIVTAHDTPRVRDALTAAIARGEHVVTMVTD
IGGIARVHYAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMAYRAHAQRMAGCMDQLGEAFGALRCDAPIETLDDDDRC
YRAVTNALRAGDEVAAIYNSGAGSAGIEAALRNAGAAGRVVWIGHEMLDQHRAYIEAGSMDIAIDQDPDGQAISALQHVL
HACGIVEQRPPGDPVEFRVFCAANVRTSAYLQA

Sequences:

>Translated_353_residues
MADPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSARARERVVAAARQLGVPRQLPDTRHGLVHVDVLLPDTDA
PFFHRLQQALQRSLQMLDRRVVVHRTIVAAADDARAAALIERPAYRRAALIVTAHDTPRVRDALTAAIARGEHVVTMVTD
IGGIARVHYAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMAYRAHAQRMAGCMDQLGEAFGALRCDAPIETLDDDDRC
YRAVTNALRAGDEVAAIYNSGAGSAGIEAALRNAGAAGRVVWIGHEMLDQHRAYIEAGSMDIAIDQDPDGQAISALQHVL
HACGIVEQRPPGDPVEFRVFCAANVRTSAYLQA
>Mature_352_residues
ADPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSARARERVVAAARQLGVPRQLPDTRHGLVHVDVLLPDTDAP
FFHRLQQALQRSLQMLDRRVVVHRTIVAAADDARAAALIERPAYRRAALIVTAHDTPRVRDALTAAIARGEHVVTMVTDI
GGIARVHYAGIDNYRAGRTAGYYIGRLAARPGRVLLLGGRMAYRAHAQRMAGCMDQLGEAFGALRCDAPIETLDDDDRCY
RAVTNALRAGDEVAAIYNSGAGSAGIEAALRNAGAAGRVVWIGHEMLDQHRAYIEAGSMDIAIDQDPDGQAISALQHVLH
ACGIVEQRPPGDPVEFRVFCAANVRTSAYLQA

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38201; Mature: 38070

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSARARERVVAAARQLGVPRQ
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
LPDTRHGLVHVDVLLPDTDAPFFHRLQQALQRSLQMLDRRVVVHRTIVAAADDARAAALI
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ERPAYRRAALIVTAHDTPRVRDALTAAIARGEHVVTMVTDIGGIARVHYAGIDNYRAGRT
HCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCHHEEEECCCCCCCCCCC
AGYYIGRLAARPGRVLLLGGRMAYRAHAQRMAGCMDQLGEAFGALRCDAPIETLDDDDRC
HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHH
YRAVTNALRAGDEVAAIYNSGAGSAGIEAALRNAGAAGRVVWIGHEMLDQHRAYIEAGSM
HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHEECCCE
DIAIDQDPDGQAISALQHVLHACGIVEQRPPGDPVEFRVFCAANVRTSAYLQA
EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEECC
>Mature Secondary Structure 
ADPSGPRWRKRTARFDEIAALAGVSTTTVDRVLNERGSVSARARERVVAAARQLGVPRQ
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
LPDTRHGLVHVDVLLPDTDAPFFHRLQQALQRSLQMLDRRVVVHRTIVAAADDARAAALI
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ERPAYRRAALIVTAHDTPRVRDALTAAIARGEHVVTMVTDIGGIARVHYAGIDNYRAGRT
HCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCHHEEEECCCCCCCCCCC
AGYYIGRLAARPGRVLLLGGRMAYRAHAQRMAGCMDQLGEAFGALRCDAPIETLDDDDRC
HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHH
YRAVTNALRAGDEVAAIYNSGAGSAGIEAALRNAGAAGRVVWIGHEMLDQHRAYIEAGSM
HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHEECCCE
DIAIDQDPDGQAISALQHVLHACGIVEQRPPGDPVEFRVFCAANVRTSAYLQA
EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA