Click here to switch to the map view.

The map label for this gene is kdsC [H]

Identifier: 161523708

GI number: 161523708

Start: 576037

End: 576573

Strand: Reverse

Name: kdsC [H]

Synonym: Bmul_0528

Alternate gene names: 161523708

Gene position: 576573-576037 (Counterclockwise)

Preceding gene: 161523709

Following gene: 161523707

Centisome position: 16.72

GC content: 68.9

Gene sequence:

>537_bases
ATGAGCGCTGCGCTGACTGCAGCCGAACGCGCGAGCCGCGTCAAGCTGATGATTTTCGACGTCGACGGCGTGCTGACCGA
CGGCGGCCTGCTGTTTACCGTTGCGGGCGATGCGATGAAGTCGTTCAATTCGCTGGACGGCCACGGCGTGAAGCTGCTCG
GCGAAGCCGGCATCGCGACCGCGATCATCACGGGCCGCCGCTCGGAGATCGTCGCGGCGCGCGCGAAGGAAATGAAGATC
ACGCACCTGTTCCAGGGCGTCGAGAACAAGCTGAGCGTCTTCACCGATCTGATCGCGTCGCTCGGCATCGCGCCGGACGC
GTGCGGCTACATGGGCGACGACTGGCCCGATCTGCCGGTGATGCTGCGCTGCGGCTTCGCGGCTGCGCCGGCGAACGCGC
ATCCGGAAGTCATCGCGCGCGCGCACTGGGTCGCGGAAGCCCGCGGCGGCGAAGGCGCGGTGCGCGAAGTGTGCGACACG
GTGCTGCGCGCGCAGCGCCGCTACGACGCGCTGCTGGCAGCCGCATGCGGAGCCTGA

Upstream 100 bases:

>100_bases
TGGAGCGCCACCGGATCAACCAGATGCTGGTCGTCGACGCCGACGGCGTGCTGATCGGCGCGCTGAACATGCACGACCTG
TTTTCGAAGAAGGTGATTTG

Downstream 100 bases:

>100_bases
CGGATGAACCCGCATTTCCGCTGGACCCAGCTGCTCCCGCTCGTTGCCGTCGCGGCGCTCGCGGGCATCACGTGGTGGCT
GCTGCAGGCGACGCTGCCGC

Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSAALTAAERASRVKLMIFDVDGVLTDGGLLFTVAGDAMKSFNSLDGHGVKLLGEAGIATAIITGRRSEIVAARAKEMKI
THLFQGVENKLSVFTDLIASLGIAPDACGYMGDDWPDLPVMLRCGFAAAPANAHPEVIARAHWVAEARGGEGAVREVCDT
VLRAQRRYDALLAAACGA

Sequences:

>Translated_178_residues
MSAALTAAERASRVKLMIFDVDGVLTDGGLLFTVAGDAMKSFNSLDGHGVKLLGEAGIATAIITGRRSEIVAARAKEMKI
THLFQGVENKLSVFTDLIASLGIAPDACGYMGDDWPDLPVMLRCGFAAAPANAHPEVIARAHWVAEARGGEGAVREVCDT
VLRAQRRYDALLAAACGA
>Mature_177_residues
SAALTAAERASRVKLMIFDVDGVLTDGGLLFTVAGDAMKSFNSLDGHGVKLLGEAGIATAIITGRRSEIVAARAKEMKIT
HLFQGVENKLSVFTDLIASLGIAPDACGYMGDDWPDLPVMLRCGFAAAPANAHPEVIARAHWVAEARGGEGAVREVCDTV
LRAQRRYDALLAAACGA

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Escherichia coli, GI2367202, Length=160, Percent_Identity=46.875, Blast_Score=154, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 18669; Mature: 18538

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAALTAAERASRVKLMIFDVDGVLTDGGLLFTVAGDAMKSFNSLDGHGVKLLGEAGIAT
CCCHHHHHHHHCEEEEEEEECCCEEECCCEEEEECCHHHHHHCCCCCCCEEEEECCCCEE
AIITGRRSEIVAARAKEMKITHLFQGVENKLSVFTDLIASLGIAPDACGYMGDDWPDLPV
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
MLRCGFAAAPANAHPEVIARAHWVAEARGGEGAVREVCDTVLRAQRRYDALLAAACGA
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAALTAAERASRVKLMIFDVDGVLTDGGLLFTVAGDAMKSFNSLDGHGVKLLGEAGIAT
CCHHHHHHHHCEEEEEEEECCCEEECCCEEEEECCHHHHHHCCCCCCCEEEEECCCCEE
AIITGRRSEIVAARAKEMKITHLFQGVENKLSVFTDLIASLGIAPDACGYMGDDWPDLPV
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
MLRCGFAAAPANAHPEVIARAHWVAEARGGEGAVREVCDTVLRAQRRYDALLAAACGA
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]