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The map label for this gene is ftsY [H]

Identifier: 161523672

GI number: 161523672

Start: 538836

End: 539978

Strand: Reverse

Name: ftsY [H]

Synonym: Bmul_0492

Alternate gene names: 161523672

Gene position: 539978-538836 (Counterclockwise)

Preceding gene: 161523679

Following gene: 161523670

Centisome position: 15.66

GC content: 67.8

Gene sequence:

>1143_bases
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGGCTCCGCGGAATCGCAGCCGGCCGACGCGCCGCAACC
CGACGCCCCGTCCGACGCGCACGACGCCGACGTTCCGCCTGCACCCGCGCCTGCCGAACCGGCCGCGCCCGCCGTCGTGA
TGACGGTCACGCCGAGCGACAACGGCCGCGACGAAGTCGTCGAGACCGTCGAAATCGTGCCGCCGCCCGTGCAGGATGCA
TCGGCGAAGAAATCGTGGCTCGCGCGCCTGAAGACGGGCCTCGCGAAAACCGGCTCGAGCATCACCGGCGTATTCGTGAA
CACGAAGATCGACGACGCGCTGTACGAGGAGCTCGAGACCGCGCTGCTGATGTCCGATGCGGGCGTCGACGCGACCGAGT
ACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGGGTGGGCCGTCTCACCGACCCGCAGCAGGTGAAGAGCGCGCTGCGCGAC
CTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAGTCGCTCGTGCTCGGCCGTGCGCAGCCGCTCGTGATGATGATCGCGGG
CGTCAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGTCGGTGCTGCTCG
CCGCGGGCGATACGTTCCGCGCCGCGGCGCGCGAACAGCTGACGGTCTGGGGCGAACGCAACAACGTGACCGTCGTGCAG
CAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGATGCGGTGAGCGCCGCGCGCGCGCGCAAGATCGATGTGATGATGGC
CGACACGGCCGGCCGCCTGCCGACGCAGCTTCATCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGATCGCGAAGGCAC
ACGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGTCAGAACGCGCTCACGCAGGTGAAGGCATTC
GACGATGCGCTCGGCCTGACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGAATTCTCGCCGCGATCGC
GCGGCAGCGGCCGGTGCCCGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCAGCGCCGAGGAAT
TCGCGGACGCGCTGCTCGGCTGA

Upstream 100 bases:

>100_bases
ATGCGGCGTTTCGGCCGCGTTGCGCGGCGCTCCGCGAGCGCCGGCGGCTGCCCGGCGCCCCGCGGCTCGCGGCGGCCCGC
CCTCTTCCCGACGTCAGACC

Downstream 100 bases:

>100_bases
TCGTCCTTCGCCGCACCGCATCGCACGAGGCGCCTTCGGGCGCCTTTTTCGTCGGTGCGGCGCCTGCGCGTCACTCGGCG
TCCGGCTGCACGCCCGGTTC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Sequences:

>Translated_380_residues
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG
>Mature_380_residues
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=285, Percent_Identity=31.9298245614035, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI226371618, Length=235, Percent_Identity=33.1914893617021, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI295424842, Length=301, Percent_Identity=30.8970099667774, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI23308697, Length=301, Percent_Identity=30.8970099667774, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=36.4963503649635, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI1789874, Length=326, Percent_Identity=49.6932515337423, Blast_Score=291, Evalue=4e-80,
Organism=Escherichia coli, GI1788963, Length=296, Percent_Identity=35.8108108108108, Blast_Score=151, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=298, Percent_Identity=28.1879194630872, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI193206261, Length=300, Percent_Identity=31, Blast_Score=113, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=307, Percent_Identity=31.2703583061889, Blast_Score=132, Evalue=8e-32,
Organism=Saccharomyces cerevisiae, GI6320498, Length=252, Percent_Identity=29.3650793650794, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17647949, Length=285, Percent_Identity=32.280701754386, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI24641198, Length=260, Percent_Identity=30.3846153846154, Blast_Score=101, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 40337; Mature: 40337

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSD
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
NGRDEVVETVEIVPPPVQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELET
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
ALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRDLLVELLTPLEKSLVLGRAQP
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
EEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHEEEEECCCCEEEEE
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHE
ECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE
VLLVIDANTGQNALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVG
EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECC
EKVEDLQPFSAEEFADALLG
CCHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSD
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
NGRDEVVETVEIVPPPVQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELET
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
ALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRDLLVELLTPLEKSLVLGRAQP
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
EEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHEEEEECCCCEEEEE
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHE
ECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE
VLLVIDANTGQNALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVG
EEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECC
EKVEDLQPFSAEEFADALLG
CCHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]