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The map label for this gene is ctpA [H]

Identifier: 161523625

GI number: 161523625

Start: 490017

End: 491564

Strand: Reverse

Name: ctpA [H]

Synonym: Bmul_0445

Alternate gene names: 161523625

Gene position: 491564-490017 (Counterclockwise)

Preceding gene: 161523626

Following gene: 161523624

Centisome position: 14.25

GC content: 65.31

Gene sequence:

>1548_bases
ATGCGAATCAAATTGAAGAACATCGGCCTGATTGCCGCGGGCCTCGCCACTGGCGTGTTCGCCACGCTGCAGATTTCCGC
ATCGGCCGAGCAGACCGTCACGGCGCCGCTTCCCCTCGACCAGCTCCGCCTGTTCGCGGAAGTCTTCGGCCAGATCAAGC
GCGAGTACGTCGAGCCGGTCGACGACAAGAAGCTGCTGACGGCGGCGATCAAGGGCATGGTGTCGAGCCTCGACCCGCAC
TCGTCGTTCCTCGACAAGACCGACTATGACGAGCTGCAGGAGCAGACGAAGGGCCGCTTCGCCGGTCTCGGCATCGAGAT
CTCGCAGGAAGACGGGCTCGTCAAGGTGATCTCGCCGATCGAAGACACGCCTGCATTCCGCGCCGGCATCCGTCCGGGCG
ACCTGATCACGCGCATCAACGACAAGCCGGTGCGCGGCATGACGCTCGACAAGGCCGTCAAGCAGATGCGCGGCGAGCCG
GGCACGAAGGTCACGCTGACGATCTTCCGCAAGAGCGACGACCGCACGTTCCCGGTCACGGTCACGCGCGCGATCATCAA
GGTTCAGAGCGTCAAGATGAAGATGCTCGATCCGGGTTACGCGTACATCCGCATCACGAGCTTCCAGGAGCGCACGACGC
CCGATCTCGCCGCGAAGCTGCAGGACATCGCGCGCCAGCAGCCGAACCTGAAGGGCCTGATCCTCGACCTGCGCAACAAC
GGCGGCGGCCTGCTGCAGAGCGCGGTCGGCGTCGCCGGCGCGTTCCTGCCGCCCGACTCCGTCGTCGTGTCGACCAACGG
CCAGATTCCGGATTCGAAACAGGTCTATCGCGACACCTACGACAACTACCGGCTGCCGTCCTTCGACGGCGATCCGCTGA
AGAGCCTGCCGCCGATCTTCAAGACGGTGCCGATGGTCGTGCTGACGAACGCGTATTCGGCGTCCGCGTCGGAAATCGTG
GCCGGCGCGCTGCAGGATTCGAAGCGCGCGCTGATCATGGGCAAGACGACCTTCGGCAAGGGCTCGGTGCAGACCGTCCG
CCCGATGACGGCCGACACCGCGCTGCGCCTGACCACGGCGTACTACTACACGCCGAGCGGCCGTTCGATCCAGAACAAGG
GCATCACGCCCGATCTGCCGGTCGATCAGTACGCCGACGGCGATCCGGACGACGTGCTCGTCACGCGCGAAGTCGACTAT
TCGAACCACCTCGCGAACACGCAGGATCCGAACGAGAAGAAGGAACAGGAAGAGCGCGAACAGCGCCGCATGGATCAGCT
GCGCATCCTCGAGGAGCAGAACGACAAGAAGACGCCGGAGCAGCGCCAGAAGGATCGCGATCGCAAGCCGATCGAGTTCG
GCAGCGCCGACGACTTCATGATGCAGCAGGCGCTCAACAAGCTCGAAGGCAAGCCGGTCCAGGAATCGAAGTCGCTGCTC
GCCGAGAGCACGAAGACCGCGGCGGGCAAGCCGGCTGCGGCAGCCAAGGCATCGGGCGCCGCCGCGAAGCCGGCCGCCGC
ACCGAAGCCCGCGTCGGCGCCGCAGTAA

Upstream 100 bases:

>100_bases
CCGTTTCGCGCCGTTCCCCCTGACCTGTCGGACGAACAGTTATACTTGTCCGCTACATCCCCGCTACCGCCACGCGCTTC
CCGACCGCACCAGACTCTCT

Downstream 100 bases:

>100_bases
GCGTCGGCCGACATCGGACGGGCCATCGCGGGAAGACCGCGATGGCCCGTTTTTCATGCGCGCCTAGAATAGACCGGTAC
GCCCGCGCCCGTTCGCGCGG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MRIKLKNIGLIAAGLATGVFATLQISASAEQTVTAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKSLPPIFKTVPMVVLTNAYSASASEIV
AGALQDSKRALIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDLPVDQYADGDPDDVLVTREVDY
SNHLANTQDPNEKKEQEEREQRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTKTAAGKPAAAAKASGAAAKPAAAPKPASAPQ

Sequences:

>Translated_515_residues
MRIKLKNIGLIAAGLATGVFATLQISASAEQTVTAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKSLPPIFKTVPMVVLTNAYSASASEIV
AGALQDSKRALIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDLPVDQYADGDPDDVLVTREVDY
SNHLANTQDPNEKKEQEEREQRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTKTAAGKPAAAAKASGAAAKPAAAPKPASAPQ
>Mature_515_residues
MRIKLKNIGLIAAGLATGVFATLQISASAEQTVTAPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDPH
SSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEP
GTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDLRNN
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKSLPPIFKTVPMVVLTNAYSASASEIV
AGALQDSKRALIMGKTTFGKGSVQTVRPMTADTALRLTTAYYYTPSGRSIQNKGITPDLPVDQYADGDPDDVLVTREVDY
SNHLANTQDPNEKKEQEEREQRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
AESTKTAAGKPAAAAKASGAAAKPAAAPKPASAPQ

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=31.2684365781711, Blast_Score=136, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 56247; Mature: 56247

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKLKNIGLIAAGLATGVFATLQISASAEQTVTAPLPLDQLRLFAEVFGQIKREYVEPV
CEEEEECCCEEHHHHHHHEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKLLTAAIKGMVSSLDPHSSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPI
CCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECCC
EDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPVT
CCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHH
VTRAIIKVQSVKMKMLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDLRNN
HHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKSLPPIF
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHH
KTVPMVVLTNAYSASASEIVAGALQDSKRALIMGKTTFGKGSVQTVRPMTADTALRLTTA
HHCCHHHEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCCCCEEEEEEE
YYYTPSGRSIQNKGITPDLPVDQYADGDPDDVLVTREVDYSNHLANTQDPNEKKEQEERE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
QRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AESTKTAAGKPAAAAKASGAAAKPAAAPKPASAPQ
HHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIKLKNIGLIAAGLATGVFATLQISASAEQTVTAPLPLDQLRLFAEVFGQIKREYVEPV
CEEEEECCCEEHHHHHHHEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCC
DDKKLLTAAIKGMVSSLDPHSSFLDKTDYDELQEQTKGRFAGLGIEISQEDGLVKVISPI
CCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECCC
EDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPVT
CCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHH
VTRAIIKVQSVKMKMLDPGYAYIRITSFQERTTPDLAAKLQDIARQQPNLKGLILDLRNN
HHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
GGGLLQSAVGVAGAFLPPDSVVVSTNGQIPDSKQVYRDTYDNYRLPSFDGDPLKSLPPIF
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHH
KTVPMVVLTNAYSASASEIVAGALQDSKRALIMGKTTFGKGSVQTVRPMTADTALRLTTA
HHCCHHHEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECCCCCCCEEEEEEE
YYYTPSGRSIQNKGITPDLPVDQYADGDPDDVLVTREVDYSNHLANTQDPNEKKEQEERE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
QRRMDQLRILEEQNDKKTPEQRQKDRDRKPIEFGSADDFMMQQALNKLEGKPVQESKSLL
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
AESTKTAAGKPAAAAKASGAAAKPAAAPKPASAPQ
HHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]