| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is comM [H]
Identifier: 161523615
GI number: 161523615
Start: 479239
End: 480855
Strand: Reverse
Name: comM [H]
Synonym: Bmul_0435
Alternate gene names: 161523615
Gene position: 480855-479239 (Counterclockwise)
Preceding gene: 161523616
Following gene: 161523613
Centisome position: 13.94
GC content: 74.34
Gene sequence:
>1617_bases ATGTCGCTCGCCGTGGTGCGCAGCCGTGCGCCGGCGGCCGGCCGTGCGCCGGACGTCACCGTCGAAGTCCATCTCGCCAA CGGGTTGCCGTCGTTCTCGATCGTCGGCCTGCCCGATCTCGAAGTCCGTGAAAGCCGCGAGCGCGTGCGCGCCGCGCTGC AGAACTGCGGATTCGAATTCCCCGTCCGACGCATCACCGTCAATCTCGCGCCGGCCGATCTGCCGAAGGAGTCGGGCCGC TTCGATCTGCCGATCGCGCTCGGCATCCTCGCGGCCAACGGGCAGATTCCCGTCGATGCGCTGGCGGGCCGCGAATTCGC CGGCGAGCTGTCGCTGACCGGCGCGCTGCGCCCGATGCGCGGCGCATTCGCGATGGCGTGCGGCCTCGCGCGCGACGCGC AGCCGGGCGGCACCGACGGCGACATCGCGCACGACACGCACGCCGGCGGCGGCGCCGAGCCGCGCGCAGCGTGCGCCCCG GCCGGTGCATCGCGCATGCCCGAGCTGTACCTGCCGCTCGCGAGTGCGGCCGAGGCGGCGCTCGTGCCCGGCGTGACCGT GTTCGGCGCGCCCGACCTCCCGGCGCTCTGCGCGCACCTTGCCGGTGCGCCGGACGGGCGGCTCTCGCCCGTCGATGCGC CCTGCCTCGACGGCCTGCCCGCGCCCGCGGCGCCCGACCTCGCCGACGTCGTCGGTCAGCGCCCCGCGCGGCGCGCGCTC GAAGTCGCGGCCGCGGGCGGCCACCACATGCTGATGGTCGGCCCGCCCGGCGCCGGCAAGTCGATGCTGGCCGCGCGGCT GCCGGGGCTGCTGCCGCCGCTCACCGACGACGAGGCGCTGACCTCGGCCGCGCTGCTGTCGGCGAGCCGCATCGGCTTCT CGCCCGCGCAATGGCGCCGCCGGCCGTTTCGGTCGCCGCATCATTCGTCGAGCGCCGCCGCGCTGGTCGGCGGACGCAAT CCGCCGCAGCCGGGCGAGATCACGCTCGCGCACCTCGGTGTGCTGTTTCTCGACGAACTGCCCGAATTCGATCGCCACGT GCTCGAAATGCTGCGCGAACCGCTCGAAGCGGGCCGCATCACGATTTCGCGCGCCGCGCAGCAGGCGGACTTTCCGGCCG CATGTCAGCTGATTGCCGCGATGAATCCCTGCCCGTGCGGCTGGCTCGGCGATCCGTCCGGCCGCTGCCGCTGCTCGCCG GATGTCGCCGCGCGCTATCTGCGCAAGCTGTCCGGGCCGCTGCTGGACCGAATCGACATTCAGATCGACCTGCCGGCGCT GTCGCCGGCCGAACTCGCCGCACGCGCGTCGACGCCCGGCGAGCCAAGCGCCGCGGTGGCCGCGCGCGTCGCGCAGGCGC GCGCGCTGCAACTGGCGCGGCAGGGCAAGACCAATCACATGCTGAGCGGGCGCGAAACCGACGACCTGTGCCGGCCGACC GACGAAGGCGAGCGGCTGTTGCGCGAGGCCGGCGAGCGCTTCGGGTGGTCGGCGCGCGCGTACTACCGCGTACTGAAGGT CGCGCGCACGATCGCCGATCTGGCCGGCGAGCCGCTGCCGACCGCGTCCCACATCGCCGAAGCGATCCGCTATCGGCGCG CGCTCGCCGCCCTCTGA
Upstream 100 bases:
>100_bases TGTTCCCCGCGCCACGCCGGCAAGCGCGCTCCGATCGTTCCGTTTCCCGCGGCATGCGGCCCCGTACGGCCGTCGCCCGA CCGTTTACAGGAGCCTCGCC
Downstream 100 bases:
>100_bases GGACAAAATCCGCGTGTCAAGACTTGACTTATGCACAATTCCACGCATCCAGCCCCGATCGACGCTGCGTGCGCAGGCGC GCGACGCCGGATTCGCATGT
Product: Mg chelatase subunit ChlI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MSLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGR FDLPIALGILAANGQIPVDALAGREFAGELSLTGALRPMRGAFAMACGLARDAQPGGTDGDIAHDTHAGGGAEPRAACAP AGASRMPELYLPLASAAEAALVPGVTVFGAPDLPALCAHLAGAPDGRLSPVDAPCLDGLPAPAAPDLADVVGQRPARRAL EVAAAGGHHMLMVGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRIGFSPAQWRRRPFRSPHHSSSAAALVGGRN PPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEAGRITISRAAQQADFPAACQLIAAMNPCPCGWLGDPSGRCRCSP DVAARYLRKLSGPLLDRIDIQIDLPALSPAELAARASTPGEPSAAVAARVAQARALQLARQGKTNHMLSGRETDDLCRPT DEGERLLREAGERFGWSARAYYRVLKVARTIADLAGEPLPTASHIAEAIRYRRALAAL
Sequences:
>Translated_538_residues MSLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGR FDLPIALGILAANGQIPVDALAGREFAGELSLTGALRPMRGAFAMACGLARDAQPGGTDGDIAHDTHAGGGAEPRAACAP AGASRMPELYLPLASAAEAALVPGVTVFGAPDLPALCAHLAGAPDGRLSPVDAPCLDGLPAPAAPDLADVVGQRPARRAL EVAAAGGHHMLMVGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRIGFSPAQWRRRPFRSPHHSSSAAALVGGRN PPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEAGRITISRAAQQADFPAACQLIAAMNPCPCGWLGDPSGRCRCSP DVAARYLRKLSGPLLDRIDIQIDLPALSPAELAARASTPGEPSAAVAARVAQARALQLARQGKTNHMLSGRETDDLCRPT DEGERLLREAGERFGWSARAYYRVLKVARTIADLAGEPLPTASHIAEAIRYRRALAAL >Mature_537_residues SLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGRF DLPIALGILAANGQIPVDALAGREFAGELSLTGALRPMRGAFAMACGLARDAQPGGTDGDIAHDTHAGGGAEPRAACAPA GASRMPELYLPLASAAEAALVPGVTVFGAPDLPALCAHLAGAPDGRLSPVDAPCLDGLPAPAAPDLADVVGQRPARRALE VAAAGGHHMLMVGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRIGFSPAQWRRRPFRSPHHSSSAAALVGGRNP PQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEAGRITISRAAQQADFPAACQLIAAMNPCPCGWLGDPSGRCRCSPD VAARYLRKLSGPLLDRIDIQIDLPALSPAELAARASTPGEPSAAVAARVAQARALQLARQGKTNHMLSGRETDDLCRPTD EGERLLREAGERFGWSARAYYRVLKVARTIADLAGEPLPTASHIAEAIRYRRALAAL
Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]
COG id: COG0606
COG function: function code O; Predicted ATPase with chaperone activity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]
Homologues:
Organism=Escherichia coli, GI145693202, Length=534, Percent_Identity=44.9438202247191, Blast_Score=427, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR001208 - InterPro: IPR004482 - InterPro: IPR000523 - InterPro: IPR020568 [H]
Pfam domain/function: PF01078 Mg_chelatase [H]
EC number: NA
Molecular weight: Translated: 56220; Mature: 56089
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEF CCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC PVRRITVNLAPADLPKESGRFDLPIALGILAANGQIPVDALAGREFAGELSLTGALRPMR CEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCHHCCCEEEHHCCCHHH GAFAMACGLARDAQPGGTDGDIAHDTHAGGGAEPRAACAPAGASRMPELYLPLASAAEAA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCHH LVPGVTVFGAPDLPALCAHLAGAPDGRLSPVDAPCLDGLPAPAAPDLADVVGQRPARRAL HCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCHHHHHH EVAAAGGHHMLMVGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRIGFSPAQWRR HHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH RPFRSPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEAGRI CCCCCCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCE TISRAAQQADFPAACQLIAAMNPCPCGWLGDPSGRCRCSPDVAARYLRKLSGPLLDRIDI EHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEEEE QIDLPALSPAELAARASTPGEPSAAVAARVAQARALQLARQGKTNHMLSGRETDDLCRPT EEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC DEGERLLREAGERFGWSARAYYRVLKVARTIADLAGEPLPTASHIAEAIRYRRALAAL CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLAVVRSRAPAAGRAPDVTVEVHLANGLPSFSIVGLPDLEVRESRERVRAALQNCGFEF CCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC PVRRITVNLAPADLPKESGRFDLPIALGILAANGQIPVDALAGREFAGELSLTGALRPMR CEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCHHCCCEEEHHCCCHHH GAFAMACGLARDAQPGGTDGDIAHDTHAGGGAEPRAACAPAGASRMPELYLPLASAAEAA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCHH LVPGVTVFGAPDLPALCAHLAGAPDGRLSPVDAPCLDGLPAPAAPDLADVVGQRPARRAL HCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCHHHHHH EVAAAGGHHMLMVGPPGAGKSMLAARLPGLLPPLTDDEALTSAALLSASRIGFSPAQWRR HHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH RPFRSPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLEAGRI CCCCCCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCE TISRAAQQADFPAACQLIAAMNPCPCGWLGDPSGRCRCSPDVAARYLRKLSGPLLDRIDI EHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEEEE QIDLPALSPAELAARASTPGEPSAAVAARVAQARALQLARQGKTNHMLSGRETDDLCRPT EEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC DEGERLLREAGERFGWSARAYYRVLKVARTIADLAGEPLPTASHIAEAIRYRRALAAL CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 9457884 [H]