Click here to switch to the map view.

The map label for this gene is ychJ [C]

Identifier: 161523556

GI number: 161523556

Start: 414109

End: 414546

Strand: Reverse

Name: ychJ [C]

Synonym: Bmul_0376

Alternate gene names: 161523556

Gene position: 414546-414109 (Counterclockwise)

Preceding gene: 161523557

Following gene: 161523555

Centisome position: 12.02

GC content: 70.09

Gene sequence:

>438_bases
ATGATTCCGAACCCACCTGATACCTGCCCGTGCGGCGGCGCGTCCCCTGCAGCGGCCGGCAAAGCCGCGCCGCCGCGCTA
TGCGGCCTGCTGCGGCCGTTTCATCGACGGCGGCGTACCCGCGCCGAGCGCACTGGAGTTGATGCGTTCGCGGTATACCG
CCTACGTGCTCGGCGCAATCGACTACCTGCGCGCGACCTGGGACGCGCGCACCTGCCCGGCGGATCTCGACATCGACCCC
GATGCGCCCGACGCGCCGCGCTGGCTCGGGCTCGCGATCAAACGCCACGCGGCGCTCGACGAAACGCACGCCGAGGTCGA
GTTCGTGGCCCGCTACAAGGTGGGCGGTCGCGCGTACCGGCTGCACGAGACGAGCCGCTTCACGCGCGACGAACACGGTT
TCTGGCGCTATGTCGACGGCGATGTAAGCGAGCGCTGA

Upstream 100 bases:

>100_bases
CGACGTCTCGCAGTCGAACGGCCGATTCTTCCAGTACGACGGCGTAGAGCTGAGCTGGTGATCGCCATTCACAACGCCTC
GTCGTTAATTCCTGTTACGC

Downstream 100 bases:

>100_bases
CAAATACTTGCTGTGTCAGACGCCGGGTAATTCCTGCATTGCACAACCTGAATTTGTCGGGCTAGGATGGCCTTCGATCG
GGTCTGTTGCATGGCAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIPNPPDTCPCGGASPAAAGKAAPPRYAACCGRFIDGGVPAPSALELMRSRYTAYVLGAIDYLRATWDARTCPADLDIDP
DAPDAPRWLGLAIKRHAALDETHAEVEFVARYKVGGRAYRLHETSRFTRDEHGFWRYVDGDVSER

Sequences:

>Translated_145_residues
MIPNPPDTCPCGGASPAAAGKAAPPRYAACCGRFIDGGVPAPSALELMRSRYTAYVLGAIDYLRATWDARTCPADLDIDP
DAPDAPRWLGLAIKRHAALDETHAEVEFVARYKVGGRAYRLHETSRFTRDEHGFWRYVDGDVSER
>Mature_145_residues
MIPNPPDTCPCGGASPAAAGKAAPPRYAACCGRFIDGGVPAPSALELMRSRYTAYVLGAIDYLRATWDARTCPADLDIDP
DAPDAPRWLGLAIKRHAALDETHAEVEFVARYKVGGRAYRLHETSRFTRDEHGFWRYVDGDVSER

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=134, Percent_Identity=38.0597014925373, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006521
- InterPro:   IPR023006 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15879; Mature: 15879

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPNPPDTCPCGGASPAAAGKAAPPRYAACCGRFIDGGVPAPSALELMRSRYTAYVLGAI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
DYLRATWDARTCPADLDIDPDAPDAPRWLGLAIKRHAALDETHAEVEFVARYKVGGRAYR
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHEEEECCCEEEE
LHETSRFTRDEHGFWRYVDGDVSER
EECCHHCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MIPNPPDTCPCGGASPAAAGKAAPPRYAACCGRFIDGGVPAPSALELMRSRYTAYVLGAI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
DYLRATWDARTCPADLDIDPDAPDAPRWLGLAIKRHAALDETHAEVEFVARYKVGGRAYR
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHEEEECCCEEEE
LHETSRFTRDEHGFWRYVDGDVSER
EECCHHCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA