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The map label for this gene is yddA [C]

Identifier: 161523492

GI number: 161523492

Start: 345154

End: 346923

Strand: Reverse

Name: yddA [C]

Synonym: Bmul_0312

Alternate gene names: 161523492

Gene position: 346923-345154 (Counterclockwise)

Preceding gene: 161523522

Following gene: 161523491

Centisome position: 10.06

GC content: 66.05

Gene sequence:

>1770_bases
ATGACCCAATCGATCGATCCCGTCCGCTCCGCCTCCGACGCGCCGCAGGACGAGCGCCCGGTATCCGCATGGAGCCTCAT
CAAGCCCTACTGGGTGTCGTCCGAATGGAAAGTCGCGTGGGCGCTGCTCGTCACGATCATCGCGATCAATCTCTGCGTCG
TCTGGATCAACGTCCAGCTGAACAAGTGGAACGCGCAGTTCTATAACGCGCTGCAGACCAAGAACGTGCACGATTTCCCG
CATCTGATGATGCAGTTCTCGATGCTCGCGTTCGGCTTCATCATCCTCGCGGTGTACGGGCTGTACTTGCGGCAGATGCT
CGGCTTCCGCTGGCGCCAGTGGCTGACCGACCGCTTTCTCGGCGAATGGCTCGGCGACCGCGCGTTCTACCGGATCGAAC
GCGACCGCCTCGCCGACAACCCCGACCAGCGCGTGGCCGACGACCTGCAGGCGTTCGCGACGACCACGCTGTCGCTGTCG
CTCGATCTGCTCTCGACGGTCGTCACGCTCGCGTCGTTCATCACGATCCTCTGGACGCTCGGCGGCGCGCTGACGCTGTC
GCTCGGCGCCACGCCCGTCTCGATCCCCGGCTACATGGTGTGGGCGGCCGCGCTCTATGCGGTGATCGGCTCGCTCGTGA
TCCAGAAGGTCGGCCGGCCGCTCGTGTCGATCAACTACCAGCAGCAGCGCGTCGAGGCGGACTTCCGCTTCGGCCTGATC
CGCGTGCGCGAAAATGCCGAGCAGATCGCGTTCTACGACGGCGAAGACACCGAAAACCGCAATGCGCAGGGCCTCTTCCT
GCGCATCCGCGACAACTGGTGGCGCGTCATGAAATACACGAAGCGCCTGACGTTCGTGAACGCGTTCTACGGACAGATCG
CGATCATCTTCCCGTTCGTCGTCGCGGCGCCGCGCTACTTCGCGGGCGCCTTCACGCTCGGCGTGCTGATGCAGATCTCG
TCCGCATTCGGCACGGTCAGCGACTCGTTCTCGTGGTTCCTCAACAGCTATCGCACGCTGGTCGAGTGGCGCGCGACCGT
CAACCGTCTGCGCGAATTCAAGCGCGTGATGCGCACCTCGCATCTGAAGGAAAGCCTGTCGCCCGCGACCGAGCACGGCG
GCATCAACCTGCACTACGTCAATGCGGCGAAGCTGTCGACATCGTCGCTGAAGCTCGCGCTGCCGAACGGCAACGCGCTC
GCCAACATCGGCAGCGTGACGATCGAGCCCGGTTCGCGCTGGCTCGTGGTCGGCAAGTCGGGCTCCGGCAAGAGCACGTT
CATGCGCGCGCTCGCCGGGCTGTGGCCGTTCGGCGACGGCGCGATCGACGCACCGGTCGGCGCGCGCATGATGTTCGTGC
CGCAATCGAGCTATCTGCCGATCGGCACGCTGAAGGCGGCGCTCGCCTATCCGTCGGCGCCCGACGCGTTCGGCGACGAC
GCGTGCCGCGACGCGCTGCGCGCATGCCACCTCGAAGACTACGTCGACCGGCTCGACGAAACCGCGCACTGGACGCGCGT
GCTGTCGCCCGGCGAACAGCAGCGTCTCGCCGGCGCGCGCGTGCTGCTGCACAAGCCCGATTTCCTGTTCCTCGACGAAG
CGACGAGCGCGCTCGATGCCGACAACGAGGCGCGGCTCTATCGCCTGTTCGCCGAGCGGCTGCCGAAGGCCGCGATCGTC
AGCATCGCGCACCGCGAATCGCTGGCCGCGTTCCACGGCGGTACGATCAACGTCGAGCGCGTGAACGACAGCGACAAGGT
GGCCGCGTGA

Upstream 100 bases:

>100_bases
CCGGACGCCCGCCGTCGGCGAGCACTCGTCCCGGCATGCCGTCTCGCGGCGCGCGCCCGGCTTCGCCCGGCCCGTGCGCC
GGCCACTCATCAGGAAGCAC

Downstream 100 bases:

>100_bases
GCGCGCGCGCAGCGCGCATCGCACTGATCACCGGCGCCGGTTCGGGAATCGGCGCGGCGCTCGCGCGGCGGCTCGCCGCA
CCGGGCGTCGCGCTCGCGCT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKVAWALLVTIIAINLCVVWINVQLNKWNAQFYNALQTKNVHDFP
HLMMQFSMLAFGFIILAVYGLYLRQMLGFRWRQWLTDRFLGEWLGDRAFYRIERDRLADNPDQRVADDLQAFATTTLSLS
LDLLSTVVTLASFITILWTLGGALTLSLGATPVSIPGYMVWAAALYAVIGSLVIQKVGRPLVSINYQQQRVEADFRFGLI
RVRENAEQIAFYDGEDTENRNAQGLFLRIRDNWWRVMKYTKRLTFVNAFYGQIAIIFPFVVAAPRYFAGAFTLGVLMQIS
SAFGTVSDSFSWFLNSYRTLVEWRATVNRLREFKRVMRTSHLKESLSPATEHGGINLHYVNAAKLSTSSLKLALPNGNAL
ANIGSVTIEPGSRWLVVGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQSSYLPIGTLKAALAYPSAPDAFGDD
ACRDALRACHLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYRLFAERLPKAAIV
SIAHRESLAAFHGGTINVERVNDSDKVAA

Sequences:

>Translated_589_residues
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKVAWALLVTIIAINLCVVWINVQLNKWNAQFYNALQTKNVHDFP
HLMMQFSMLAFGFIILAVYGLYLRQMLGFRWRQWLTDRFLGEWLGDRAFYRIERDRLADNPDQRVADDLQAFATTTLSLS
LDLLSTVVTLASFITILWTLGGALTLSLGATPVSIPGYMVWAAALYAVIGSLVIQKVGRPLVSINYQQQRVEADFRFGLI
RVRENAEQIAFYDGEDTENRNAQGLFLRIRDNWWRVMKYTKRLTFVNAFYGQIAIIFPFVVAAPRYFAGAFTLGVLMQIS
SAFGTVSDSFSWFLNSYRTLVEWRATVNRLREFKRVMRTSHLKESLSPATEHGGINLHYVNAAKLSTSSLKLALPNGNAL
ANIGSVTIEPGSRWLVVGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQSSYLPIGTLKAALAYPSAPDAFGDD
ACRDALRACHLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYRLFAERLPKAAIV
SIAHRESLAAFHGGTINVERVNDSDKVAA
>Mature_588_residues
TQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKVAWALLVTIIAINLCVVWINVQLNKWNAQFYNALQTKNVHDFPH
LMMQFSMLAFGFIILAVYGLYLRQMLGFRWRQWLTDRFLGEWLGDRAFYRIERDRLADNPDQRVADDLQAFATTTLSLSL
DLLSTVVTLASFITILWTLGGALTLSLGATPVSIPGYMVWAAALYAVIGSLVIQKVGRPLVSINYQQQRVEADFRFGLIR
VRENAEQIAFYDGEDTENRNAQGLFLRIRDNWWRVMKYTKRLTFVNAFYGQIAIIFPFVVAAPRYFAGAFTLGVLMQISS
AFGTVSDSFSWFLNSYRTLVEWRATVNRLREFKRVMRTSHLKESLSPATEHGGINLHYVNAAKLSTSSLKLALPNGNALA
NIGSVTIEPGSRWLVVGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQSSYLPIGTLKAALAYPSAPDAFGDDA
CRDALRACHLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYRLFAERLPKAAIVS
IAHRESLAAFHGGTINVERVNDSDKVAA

Specific function: Unknown

COG id: COG4178

COG function: function code R; ABC-type uncharacterized transport system, permease and ATPase components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4826958, Length=549, Percent_Identity=26.775956284153, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI4506341, Length=607, Percent_Identity=23.3937397034596, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI9945308, Length=597, Percent_Identity=24.6231155778894, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI7262393, Length=573, Percent_Identity=23.0366492146597, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI134142345, Length=441, Percent_Identity=24.4897959183673, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI134142342, Length=441, Percent_Identity=24.4897959183673, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI134142337, Length=441, Percent_Identity=24.4897959183673, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI134142340, Length=441, Percent_Identity=24.4897959183673, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI9955963, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI255708477, Length=197, Percent_Identity=30.9644670050761, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI9955966, Length=187, Percent_Identity=31.5508021390374, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI45243524, Length=187, Percent_Identity=31.5508021390374, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI9955968, Length=187, Percent_Identity=31.5508021390374, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI148612844, Length=197, Percent_Identity=30.9644670050761, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI66529005, Length=177, Percent_Identity=29.3785310734463, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI25914749, Length=239, Percent_Identity=27.1966527196653, Blast_Score=66, Evalue=1e-10,
Organism=Escherichia coli, GI1787772, Length=544, Percent_Identity=32.5367647058824, Blast_Score=303, Evalue=2e-83,
Organism=Escherichia coli, GI1786575, Length=340, Percent_Identity=26.1764705882353, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1787112, Length=182, Percent_Identity=31.3186813186813, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787143, Length=185, Percent_Identity=29.7297297297297, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17542146, Length=570, Percent_Identity=24.3859649122807, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17532409, Length=525, Percent_Identity=25.9047619047619, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17532411, Length=560, Percent_Identity=25.3571428571429, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17564250, Length=585, Percent_Identity=24.7863247863248, Blast_Score=124, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI72000518, Length=626, Percent_Identity=24.6006389776358, Blast_Score=116, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI72000520, Length=566, Percent_Identity=24.2049469964664, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17558960, Length=213, Percent_Identity=34.7417840375587, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI25146765, Length=271, Percent_Identity=29.520295202952, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71992070, Length=271, Percent_Identity=29.520295202952, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71992066, Length=271, Percent_Identity=29.520295202952, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI86564969, Length=271, Percent_Identity=29.520295202952, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71992080, Length=258, Percent_Identity=27.5193798449612, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71992285, Length=201, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=274, Percent_Identity=27.3722627737226, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17569081, Length=177, Percent_Identity=28.8135593220339, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17511077, Length=180, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115533592, Length=612, Percent_Identity=23.202614379085, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17556528, Length=182, Percent_Identity=30.2197802197802, Blast_Score=69, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6325110, Length=176, Percent_Identity=34.6590909090909, Blast_Score=103, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6324985, Length=179, Percent_Identity=31.8435754189944, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323217, Length=182, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24643394, Length=505, Percent_Identity=25.7425742574257, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24638550, Length=529, Percent_Identity=24.952741020794, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24638552, Length=529, Percent_Identity=24.952741020794, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24638554, Length=529, Percent_Identity=24.952741020794, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24638546, Length=529, Percent_Identity=24.952741020794, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24638556, Length=529, Percent_Identity=24.952741020794, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24638548, Length=529, Percent_Identity=24.952741020794, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24638558, Length=529, Percent_Identity=24.952741020794, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI21357907, Length=280, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24641565, Length=181, Percent_Identity=33.7016574585635, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010509
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF06472 ABC_membrane_2; PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 65926; Mature: 65795

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKVAWALLVTIIAINLCVVWINVQL
CCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEE
NKWNAQFYNALQTKNVHDFPHLMMQFSMLAFGFIILAVYGLYLRQMLGFRWRQWLTDRFL
ECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEWLGDRAFYRIERDRLADNPDQRVADDLQAFATTTLSLSLDLLSTVVTLASFITILWTL
HHHHCCHHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGALTLSLGATPVSIPGYMVWAAALYAVIGSLVIQKVGRPLVSINYQQQRVEADFRFGLI
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHEEE
RVRENAEQIAFYDGEDTENRNAQGLFLRIRDNWWRVMKYTKRLTFVNAFYGQIAIIFPFV
EEECCCCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAPRYFAGAFTLGVLMQISSAFGTVSDSFSWFLNSYRTLVEWRATVNRLREFKRVMRTS
HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLKESLSPATEHGGINLHYVNAAKLSTSSLKLALPNGNALANIGSVTIEPGSRWLVVGKS
HHHHHCCCCHHCCCEEEEEEEHHEECCCCEEEECCCCCCEEECCEEEECCCCEEEEEECC
GSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQSSYLPIGTLKAALAYPSAPDAFGDD
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCH
ACRDALRACHLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCEEEEECHHHHCCC
DNEARLYRLFAERLPKAAIVSIAHRESLAAFHGGTINVERVNDSDKVAA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
TQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKVAWALLVTIIAINLCVVWINVQL
CCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEE
NKWNAQFYNALQTKNVHDFPHLMMQFSMLAFGFIILAVYGLYLRQMLGFRWRQWLTDRFL
ECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEWLGDRAFYRIERDRLADNPDQRVADDLQAFATTTLSLSLDLLSTVVTLASFITILWTL
HHHHCCHHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGALTLSLGATPVSIPGYMVWAAALYAVIGSLVIQKVGRPLVSINYQQQRVEADFRFGLI
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHEEE
RVRENAEQIAFYDGEDTENRNAQGLFLRIRDNWWRVMKYTKRLTFVNAFYGQIAIIFPFV
EEECCCCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAPRYFAGAFTLGVLMQISSAFGTVSDSFSWFLNSYRTLVEWRATVNRLREFKRVMRTS
HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLKESLSPATEHGGINLHYVNAAKLSTSSLKLALPNGNALANIGSVTIEPGSRWLVVGKS
HHHHHCCCCHHCCCEEEEEEEHHEECCCCEEEECCCCCCEEECCEEEECCCCEEEEEECC
GSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQSSYLPIGTLKAALAYPSAPDAFGDD
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCH
ACRDALRACHLEDYVDRLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCEEEEECHHHHCCC
DNEARLYRLFAERLPKAAIVSIAHRESLAAFHGGTINVERVNDSDKVAA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]